Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHD5Q8TDI0 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CHD5Q8TDI0 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHD5Q8TDI0 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHD5Q8TDI0 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.23■□□□□ 0.03
CHD5Q8TDI0 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHD5Q8TDI0 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.23■□□□□ 0.03
CHD5Q8TDI0 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CHD5Q8TDI0 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHD5Q8TDI0 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHD5Q8TDI0 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHD5Q8TDI0 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHD5Q8TDI0 TPM3P8-201ENST00000330554 643 ntBASIC15.23■□□□□ 0.03
CHD5Q8TDI0 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.23■□□□□ 0.03
CHD5Q8TDI0 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CHD5Q8TDI0 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.23■□□□□ 0.03
CHD5Q8TDI0 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.23■□□□□ 0.03
CHD5Q8TDI0 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHD5Q8TDI0 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.23■□□□□ 0.03
CHD5Q8TDI0 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.23■□□□□ 0.03
CHD5Q8TDI0 AL583810.1-201ENST00000553344 1045 ntBASIC15.23■□□□□ 0.03
CHD5Q8TDI0 AP006547.1-201ENST00000563435 692 ntBASIC15.23■□□□□ 0.03
CHD5Q8TDI0 BX088702.1-201ENST00000610784 235 ntBASIC15.23■□□□□ 0.03
CHD5Q8TDI0 SALL4P5-201ENST00000419001 1760 ntBASIC15.23■□□□□ 0.03
CHD5Q8TDI0 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHD5Q8TDI0 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CHD5Q8TDI0 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHD5Q8TDI0 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.23■□□□□ 0.03
CHD5Q8TDI0 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHD5Q8TDI0 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 AC020910.5-201ENST00000623668 1865 ntBASIC15.22■□□□□ 0.03
CHD5Q8TDI0 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 AC026434.2-201ENST00000506094 1078 ntBASIC15.22■□□□□ 0.03
CHD5Q8TDI0 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 AC018529.2-202ENST00000611482 3087 ntBASIC15.22■□□□□ 0.03
CHD5Q8TDI0 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 Z98259.2-201ENST00000641583 609 ntBASIC15.22■□□□□ 0.03
CHD5Q8TDI0 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHD5Q8TDI0 CICP14-201ENST00000629111 2732 ntBASIC15.21■□□□□ 0.03
CHD5Q8TDI0 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHD5Q8TDI0 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHD5Q8TDI0 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHD5Q8TDI0 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.21■□□□□ 0.03
CHD5Q8TDI0 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CHD5Q8TDI0 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHD5Q8TDI0 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.21■□□□□ 0.03
CHD5Q8TDI0 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHD5Q8TDI0 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.21■□□□□ 0.03
CHD5Q8TDI0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CHD5Q8TDI0 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CHD5Q8TDI0 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CHD5Q8TDI0 AL390755.1-201ENST00000623716 2027 ntBASIC15.21■□□□□ 0.03
CHD5Q8TDI0 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHD5Q8TDI0 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CHD5Q8TDI0 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CHD5Q8TDI0 COX5BP1-201ENST00000507622 393 ntBASIC15.21■□□□□ 0.03
CHD5Q8TDI0 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.21■□□□□ 0.03
CHD5Q8TDI0 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms