Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 AC004066.1-201ENST00000502488 802 ntBASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LSMEM1Q8N8F7 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LSMEM1Q8N8F7 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
LSMEM1Q8N8F7 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
LSMEM1Q8N8F7 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LSMEM1Q8N8F7 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LSMEM1Q8N8F7 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.02□□□□□ -0.16
LSMEM1Q8N8F7 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
LSMEM1Q8N8F7 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.02□□□□□ -0.16
LSMEM1Q8N8F7 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LSMEM1Q8N8F7 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.02□□□□□ -0.16
LSMEM1Q8N8F7 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LSMEM1Q8N8F7 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LSMEM1Q8N8F7 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.02□□□□□ -0.16
LSMEM1Q8N8F7 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LSMEM1Q8N8F7 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.02□□□□□ -0.16
LSMEM1Q8N8F7 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LSMEM1Q8N8F7 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LSMEM1Q8N8F7 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LSMEM1Q8N8F7 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.02□□□□□ -0.16
LSMEM1Q8N8F7 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LSMEM1Q8N8F7 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LSMEM1Q8N8F7 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
LSMEM1Q8N8F7 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
LSMEM1Q8N8F7 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LSMEM1Q8N8F7 CLK3P2-201ENST00000427566 1453 ntBASIC14.02□□□□□ -0.16
LSMEM1Q8N8F7 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LSMEM1Q8N8F7 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
LSMEM1Q8N8F7 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LSMEM1Q8N8F7 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LSMEM1Q8N8F7 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LSMEM1Q8N8F7 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.16
LSMEM1Q8N8F7 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LSMEM1Q8N8F7 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LSMEM1Q8N8F7 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
LSMEM1Q8N8F7 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LSMEM1Q8N8F7 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LSMEM1Q8N8F7 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LSMEM1Q8N8F7 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LSMEM1Q8N8F7 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.02□□□□□ -0.17
LSMEM1Q8N8F7 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.02□□□□□ -0.17
LSMEM1Q8N8F7 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.02□□□□□ -0.17
LSMEM1Q8N8F7 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.02□□□□□ -0.17
LSMEM1Q8N8F7 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LSMEM1Q8N8F7 SPDYE18-201ENST00000510091 1050 ntBASIC14.02□□□□□ -0.17
LSMEM1Q8N8F7 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LSMEM1Q8N8F7 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LSMEM1Q8N8F7 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LSMEM1Q8N8F7 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.02□□□□□ -0.17
LSMEM1Q8N8F7 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
LSMEM1Q8N8F7 RARRES2P5-201ENST00000564013 466 ntBASIC14.02□□□□□ -0.17
LSMEM1Q8N8F7 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.02□□□□□ -0.17
LSMEM1Q8N8F7 AC068587.6-202ENST00000641839 5619 ntBASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms