Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 LHX6-205ENST00000464484 666 ntTSL 2 BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 FAM86LP-201ENST00000478302 853 ntBASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 AC093726.1-201ENST00000608064 963 ntBASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 AC087481.3-201ENST00000602886 1894 ntBASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
C11orf42Q8N5U0 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
C11orf42Q8N5U0 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC12.77□□□□□ -0.36
C11orf42Q8N5U0 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.77□□□□□ -0.36
C11orf42Q8N5U0 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
C11orf42Q8N5U0 TMBIM7P-203ENST00000641617 1718 ntBASIC12.77□□□□□ -0.36
C11orf42Q8N5U0 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
C11orf42Q8N5U0 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
C11orf42Q8N5U0 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
C11orf42Q8N5U0 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
C11orf42Q8N5U0 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
C11orf42Q8N5U0 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC12.77□□□□□ -0.37
C11orf42Q8N5U0 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.77□□□□□ -0.37
C11orf42Q8N5U0 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
C11orf42Q8N5U0 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
C11orf42Q8N5U0 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
C11orf42Q8N5U0 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC12.77□□□□□ -0.37
C11orf42Q8N5U0 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
C11orf42Q8N5U0 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
C11orf42Q8N5U0 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC12.77□□□□□ -0.37
C11orf42Q8N5U0 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC12.77□□□□□ -0.37
C11orf42Q8N5U0 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.77□□□□□ -0.37
C11orf42Q8N5U0 GAPDHP40-201ENST00000505218 1006 ntBASIC12.77□□□□□ -0.37
C11orf42Q8N5U0 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC12.77□□□□□ -0.37
C11orf42Q8N5U0 AC123567.1-201ENST00000548294 1261 ntBASIC12.77□□□□□ -0.37
C11orf42Q8N5U0 AC036164.1-201ENST00000570544 333 ntBASIC12.77□□□□□ -0.37
C11orf42Q8N5U0 COX11-202ENST00000571584 1108 ntTSL 2 BASIC12.77□□□□□ -0.37
C11orf42Q8N5U0 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
C11orf42Q8N5U0 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
C11orf42Q8N5U0 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.77□□□□□ -0.37
C11orf42Q8N5U0 BRI3BPP1-201ENST00000594224 787 ntBASIC12.77□□□□□ -0.37
C11orf42Q8N5U0 TMEM261P1-201ENST00000604899 340 ntBASIC12.77□□□□□ -0.37
C11orf42Q8N5U0 LINC02084-201ENST00000606069 1096 ntBASIC12.77□□□□□ -0.37
C11orf42Q8N5U0 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
C11orf42Q8N5U0 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
C11orf42Q8N5U0 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
C11orf42Q8N5U0 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
C11orf42Q8N5U0 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
C11orf42Q8N5U0 AC112693.3-201ENST00000624819 1983 ntBASIC12.77□□□□□ -0.37
C11orf42Q8N5U0 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
C11orf42Q8N5U0 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC12.77□□□□□ -0.37
C11orf42Q8N5U0 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
C11orf42Q8N5U0 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.77□□□□□ -0.37
C11orf42Q8N5U0 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
C11orf42Q8N5U0 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
C11orf42Q8N5U0 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
C11orf42Q8N5U0 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC12.77□□□□□ -0.37
C11orf42Q8N5U0 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
C11orf42Q8N5U0 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
C11orf42Q8N5U0 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
C11orf42Q8N5U0 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
C11orf42Q8N5U0 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms