Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC069335.1-201ENST00000489972 472 ntBASIC15.22■□□□□ 0.03
NUDCD3Q8IVD9 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.22■□□□□ 0.03
NUDCD3Q8IVD9 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.22■□□□□ 0.03
NUDCD3Q8IVD9 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NUDCD3Q8IVD9 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.22■□□□□ 0.03
NUDCD3Q8IVD9 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.22■□□□□ 0.03
NUDCD3Q8IVD9 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.22■□□□□ 0.03
NUDCD3Q8IVD9 AC140113.2-201ENST00000604370 208 ntBASIC15.22■□□□□ 0.03
NUDCD3Q8IVD9 AC027601.4-201ENST00000611259 610 ntBASIC15.22■□□□□ 0.03
NUDCD3Q8IVD9 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NUDCD3Q8IVD9 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.22■□□□□ 0.03
NUDCD3Q8IVD9 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NUDCD3Q8IVD9 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NUDCD3Q8IVD9 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NUDCD3Q8IVD9 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NUDCD3Q8IVD9 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NUDCD3Q8IVD9 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
NUDCD3Q8IVD9 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NUDCD3Q8IVD9 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
NUDCD3Q8IVD9 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.22■□□□□ 0.03
NUDCD3Q8IVD9 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NUDCD3Q8IVD9 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.22■□□□□ 0.03
NUDCD3Q8IVD9 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC15.22■□□□□ 0.03
NUDCD3Q8IVD9 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NUDCD3Q8IVD9 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.22■□□□□ 0.03
NUDCD3Q8IVD9 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NUDCD3Q8IVD9 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NUDCD3Q8IVD9 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
NUDCD3Q8IVD9 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NUDCD3Q8IVD9 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NUDCD3Q8IVD9 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NUDCD3Q8IVD9 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
NUDCD3Q8IVD9 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
NUDCD3Q8IVD9 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NUDCD3Q8IVD9 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NUDCD3Q8IVD9 IL9RP2-201ENST00000423948 1312 ntBASIC15.21■□□□□ 0.03
NUDCD3Q8IVD9 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.21■□□□□ 0.03
NUDCD3Q8IVD9 AC152010.1-201ENST00000415779 2006 ntBASIC15.21■□□□□ 0.03
NUDCD3Q8IVD9 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NUDCD3Q8IVD9 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
NUDCD3Q8IVD9 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
NUDCD3Q8IVD9 AC015802.1-201ENST00000588104 1449 ntBASIC15.21■□□□□ 0.03
NUDCD3Q8IVD9 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NUDCD3Q8IVD9 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.21■□□□□ 0.03
NUDCD3Q8IVD9 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
NUDCD3Q8IVD9 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.21■□□□□ 0.03
NUDCD3Q8IVD9 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NUDCD3Q8IVD9 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
NUDCD3Q8IVD9 MED15P5-201ENST00000423150 992 ntBASIC15.21■□□□□ 0.03
NUDCD3Q8IVD9 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.21■□□□□ 0.03
NUDCD3Q8IVD9 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.03
NUDCD3Q8IVD9 BANF1P1-201ENST00000553684 263 ntBASIC15.21■□□□□ 0.03
NUDCD3Q8IVD9 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.21■□□□□ 0.03
NUDCD3Q8IVD9 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.21■□□□□ 0.03
NUDCD3Q8IVD9 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.21■□□□□ 0.03
NUDCD3Q8IVD9 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.21■□□□□ 0.03
NUDCD3Q8IVD9 AC055717.3-201ENST00000622967 595 ntBASIC15.21■□□□□ 0.03
NUDCD3Q8IVD9 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.21■□□□□ 0.03
NUDCD3Q8IVD9 AL645728.2-202ENST00000641679 227 ntBASIC15.21■□□□□ 0.03
NUDCD3Q8IVD9 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.21■□□□□ 0.03
NUDCD3Q8IVD9 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NUDCD3Q8IVD9 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NUDCD3Q8IVD9 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NUDCD3Q8IVD9 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.21■□□□□ 0.03
NUDCD3Q8IVD9 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
NUDCD3Q8IVD9 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NUDCD3Q8IVD9 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
NUDCD3Q8IVD9 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
NUDCD3Q8IVD9 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.21■□□□□ 0.03
NUDCD3Q8IVD9 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.21■□□□□ 0.02
NUDCD3Q8IVD9 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.21■□□□□ 0.02
NUDCD3Q8IVD9 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NUDCD3Q8IVD9 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NUDCD3Q8IVD9 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 AC092135.3-201ENST00000624151 1846 ntBASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.2■□□□□ 0.02
NUDCD3Q8IVD9 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms