Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 AP006294.1-201ENST00000415407 339 ntBASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 HLA-K-203ENST00000430151 1046 ntBASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 COX20P2-201ENST00000452636 358 ntBASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 RN7SL837P-201ENST00000463010 287 ntBASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 USP28-214ENST00000545540 3431 ntTSL 2 BASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RAB11FIP4Q86YS3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.89■□□□□ 0.46
RAB11FIP4Q86YS3 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
RAB11FIP4Q86YS3 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RAB11FIP4Q86YS3 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC17.89■□□□□ 0.46
RAB11FIP4Q86YS3 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RAB11FIP4Q86YS3 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB11FIP4Q86YS3 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB11FIP4Q86YS3 USP35-204ENST00000530267 2419 ntTSL 2 BASIC17.89■□□□□ 0.45
RAB11FIP4Q86YS3 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
RAB11FIP4Q86YS3 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB11FIP4Q86YS3 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB11FIP4Q86YS3 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.89■□□□□ 0.45
RAB11FIP4Q86YS3 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB11FIP4Q86YS3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
RAB11FIP4Q86YS3 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RAB11FIP4Q86YS3 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.89■□□□□ 0.45
RAB11FIP4Q86YS3 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAB11FIP4Q86YS3 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB11FIP4Q86YS3 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.89■□□□□ 0.45
RAB11FIP4Q86YS3 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.89■□□□□ 0.45
RAB11FIP4Q86YS3 RN7SL752P-201ENST00000463779 287 ntBASIC17.89■□□□□ 0.45
RAB11FIP4Q86YS3 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.89■□□□□ 0.45
RAB11FIP4Q86YS3 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.89■□□□□ 0.45
RAB11FIP4Q86YS3 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.89■□□□□ 0.45
RAB11FIP4Q86YS3 AC093813.1-201ENST00000605066 256 ntBASIC17.89■□□□□ 0.45
RAB11FIP4Q86YS3 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
RAB11FIP4Q86YS3 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB11FIP4Q86YS3 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB11FIP4Q86YS3 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB11FIP4Q86YS3 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB11FIP4Q86YS3 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB11FIP4Q86YS3 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB11FIP4Q86YS3 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAB11FIP4Q86YS3 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.89■□□□□ 0.45
RAB11FIP4Q86YS3 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB11FIP4Q86YS3 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAB11FIP4Q86YS3 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAB11FIP4Q86YS3 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.89■□□□□ 0.45
RAB11FIP4Q86YS3 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB11FIP4Q86YS3 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RAB11FIP4Q86YS3 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAB11FIP4Q86YS3 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC17.89■□□□□ 0.45
RAB11FIP4Q86YS3 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB11FIP4Q86YS3 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.89■□□□□ 0.45
RAB11FIP4Q86YS3 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAB11FIP4Q86YS3 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.89■□□□□ 0.45
RAB11FIP4Q86YS3 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB11FIP4Q86YS3 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB11FIP4Q86YS3 AC012508.2-201ENST00000567613 1472 ntBASIC17.88■□□□□ 0.45
RAB11FIP4Q86YS3 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB11FIP4Q86YS3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB11FIP4Q86YS3 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC17.88■□□□□ 0.45
RAB11FIP4Q86YS3 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB11FIP4Q86YS3 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RAB11FIP4Q86YS3 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB11FIP4Q86YS3 AC015656.1-201ENST00000624209 3578 ntBASIC17.88■□□□□ 0.45
RAB11FIP4Q86YS3 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB11FIP4Q86YS3 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RAB11FIP4Q86YS3 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms