Protein–RNA interactions for Protein: Q86WV1

SKAP1, Src kinase-associated phosphoprotein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP1Q86WV1 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC19.03■□□□□ 0.64
SKAP1Q86WV1 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SKAP1Q86WV1 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SKAP1Q86WV1 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC19.02■□□□□ 0.64
SKAP1Q86WV1 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SKAP1Q86WV1 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SKAP1Q86WV1 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SKAP1Q86WV1 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC19.02■□□□□ 0.64
SKAP1Q86WV1 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SKAP1Q86WV1 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SKAP1Q86WV1 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SKAP1Q86WV1 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SKAP1Q86WV1 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SKAP1Q86WV1 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SKAP1Q86WV1 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
SKAP1Q86WV1 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SKAP1Q86WV1 AC015802.1-201ENST00000588104 1449 ntBASIC19.02■□□□□ 0.64
SKAP1Q86WV1 MST1P2-201ENST00000457982 2291 ntBASIC19.02■□□□□ 0.64
SKAP1Q86WV1 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SKAP1Q86WV1 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SKAP1Q86WV1 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC19.02■□□□□ 0.64
SKAP1Q86WV1 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SKAP1Q86WV1 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.02■□□□□ 0.64
SKAP1Q86WV1 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SKAP1Q86WV1 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.02■□□□□ 0.64
SKAP1Q86WV1 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
SKAP1Q86WV1 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.02■□□□□ 0.64
SKAP1Q86WV1 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC19.02■□□□□ 0.64
SKAP1Q86WV1 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SKAP1Q86WV1 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SKAP1Q86WV1 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC19.02■□□□□ 0.64
SKAP1Q86WV1 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC19.02■□□□□ 0.64
SKAP1Q86WV1 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC19.02■□□□□ 0.64
SKAP1Q86WV1 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SKAP1Q86WV1 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC19.02■□□□□ 0.64
SKAP1Q86WV1 Z92544.3-201ENST00000624747 417 ntBASIC19.02■□□□□ 0.64
SKAP1Q86WV1 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC19.02■□□□□ 0.64
SKAP1Q86WV1 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC19.02■□□□□ 0.64
SKAP1Q86WV1 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SKAP1Q86WV1 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
SKAP1Q86WV1 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SKAP1Q86WV1 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC19.02■□□□□ 0.63
SKAP1Q86WV1 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC19.02■□□□□ 0.63
SKAP1Q86WV1 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
SKAP1Q86WV1 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SKAP1Q86WV1 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
SKAP1Q86WV1 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SKAP1Q86WV1 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC19.02■□□□□ 0.63
SKAP1Q86WV1 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC19.02■□□□□ 0.63
SKAP1Q86WV1 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SKAP1Q86WV1 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SKAP1Q86WV1 API5-203ENST00000455725 2257 ntTSL 2 BASIC19.02■□□□□ 0.63
SKAP1Q86WV1 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.02■□□□□ 0.63
SKAP1Q86WV1 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC19.02■□□□□ 0.63
SKAP1Q86WV1 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SKAP1Q86WV1 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SKAP1Q86WV1 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC19.01■□□□□ 0.63
SKAP1Q86WV1 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SKAP1Q86WV1 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SKAP1Q86WV1 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
SKAP1Q86WV1 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SKAP1Q86WV1 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SKAP1Q86WV1 AL354702.1-201ENST00000442006 1960 ntBASIC19.01■□□□□ 0.63
SKAP1Q86WV1 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SKAP1Q86WV1 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC19.01■□□□□ 0.63
SKAP1Q86WV1 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SKAP1Q86WV1 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SKAP1Q86WV1 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC19.01■□□□□ 0.63
SKAP1Q86WV1 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SKAP1Q86WV1 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SKAP1Q86WV1 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SKAP1Q86WV1 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC19.01■□□□□ 0.63
SKAP1Q86WV1 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC19.01■□□□□ 0.63
SKAP1Q86WV1 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SKAP1Q86WV1 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SKAP1Q86WV1 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SKAP1Q86WV1 UPF3AP3-201ENST00000420996 769 ntBASIC19.01■□□□□ 0.63
SKAP1Q86WV1 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SKAP1Q86WV1 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC19.01■□□□□ 0.63
SKAP1Q86WV1 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SKAP1Q86WV1 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.01■□□□□ 0.63
SKAP1Q86WV1 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.01■□□□□ 0.63
SKAP1Q86WV1 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.01■□□□□ 0.63
SKAP1Q86WV1 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.01■□□□□ 0.63
SKAP1Q86WV1 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.01■□□□□ 0.63
SKAP1Q86WV1 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SKAP1Q86WV1 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC19.01■□□□□ 0.63
SKAP1Q86WV1 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC19.01■□□□□ 0.63
SKAP1Q86WV1 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SKAP1Q86WV1 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SKAP1Q86WV1 CYP2AB1P-202ENST00000454440 1456 ntBASIC19.01■□□□□ 0.63
SKAP1Q86WV1 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SKAP1Q86WV1 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SKAP1Q86WV1 LSS-211ENST00000522411 2523 ntTSL 2 BASIC19.01■□□□□ 0.63
SKAP1Q86WV1 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SKAP1Q86WV1 AL137783.1-201ENST00000623494 1896 ntBASIC19.01■□□□□ 0.63
SKAP1Q86WV1 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SKAP1Q86WV1 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SKAP1Q86WV1 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC19■□□□□ 0.63
SKAP1Q86WV1 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms