Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM53Q6P2H8 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.12□□□□□ -0.15
TMEM53Q6P2H8 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.12□□□□□ -0.15
TMEM53Q6P2H8 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM53Q6P2H8 AL139010.1-201ENST00000454878 894 ntBASIC14.12□□□□□ -0.15
TMEM53Q6P2H8 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TMEM53Q6P2H8 AC025678.2-201ENST00000562061 970 ntBASIC14.12□□□□□ -0.15
TMEM53Q6P2H8 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM53Q6P2H8 AC027612.4-201ENST00000605371 583 ntBASIC14.12□□□□□ -0.15
TMEM53Q6P2H8 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.12□□□□□ -0.15
TMEM53Q6P2H8 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC14.12□□□□□ -0.15
TMEM53Q6P2H8 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM53Q6P2H8 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM53Q6P2H8 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM53Q6P2H8 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
TMEM53Q6P2H8 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM53Q6P2H8 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM53Q6P2H8 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.12□□□□□ -0.15
TMEM53Q6P2H8 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM53Q6P2H8 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.12□□□□□ -0.15
TMEM53Q6P2H8 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM53Q6P2H8 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 GPS2P2-201ENST00000430745 888 ntBASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 SPDYE14P-201ENST00000442619 822 ntBASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 AC019294.4-201ENST00000561777 2905 ntBASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 AC006538.3-201ENST00000612495 578 ntBASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.11□□□□□ -0.15
TMEM53Q6P2H8 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 AC140479.7-201ENST00000636301 2332 ntBASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms