Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VARS2Q5ST30 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VARS2Q5ST30 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VARS2Q5ST30 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC16.13■□□□□ 0.17
VARS2Q5ST30 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC16.13■□□□□ 0.17
VARS2Q5ST30 AC026434.2-201ENST00000506094 1078 ntBASIC16.13■□□□□ 0.17
VARS2Q5ST30 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.13■□□□□ 0.17
VARS2Q5ST30 SETP12-201ENST00000514068 805 ntBASIC16.13■□□□□ 0.17
VARS2Q5ST30 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
VARS2Q5ST30 AC022087.1-201ENST00000558372 612 ntTSL 3 BASIC16.13■□□□□ 0.17
VARS2Q5ST30 AC106820.3-201ENST00000561653 397 ntBASIC16.13■□□□□ 0.17
VARS2Q5ST30 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC16.13■□□□□ 0.17
VARS2Q5ST30 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC16.13■□□□□ 0.17
VARS2Q5ST30 PPY2P-201ENST00000582808 702 ntBASIC16.13■□□□□ 0.17
VARS2Q5ST30 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VARS2Q5ST30 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.13■□□□□ 0.17
VARS2Q5ST30 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.13■□□□□ 0.17
VARS2Q5ST30 AC073413.1-201ENST00000603927 732 ntBASIC16.13■□□□□ 0.17
VARS2Q5ST30 AC106872.11-201ENST00000605838 421 ntBASIC16.13■□□□□ 0.17
VARS2Q5ST30 AC083964.1-201ENST00000607549 630 ntBASIC16.13■□□□□ 0.17
VARS2Q5ST30 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VARS2Q5ST30 AL096828.3-201ENST00000615354 462 ntBASIC16.13■□□□□ 0.17
VARS2Q5ST30 AL008638.5-201ENST00000623814 1298 ntBASIC16.13■□□□□ 0.17
VARS2Q5ST30 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
VARS2Q5ST30 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
VARS2Q5ST30 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VARS2Q5ST30 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.13■□□□□ 0.17
VARS2Q5ST30 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
VARS2Q5ST30 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VARS2Q5ST30 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
VARS2Q5ST30 AL359258.3-201ENST00000622910 2331 ntBASIC16.13■□□□□ 0.17
VARS2Q5ST30 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VARS2Q5ST30 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VARS2Q5ST30 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VARS2Q5ST30 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VARS2Q5ST30 CLUHP2-201ENST00000426660 1303 ntBASIC16.13■□□□□ 0.17
VARS2Q5ST30 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VARS2Q5ST30 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VARS2Q5ST30 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.13■□□□□ 0.17
VARS2Q5ST30 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
VARS2Q5ST30 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
VARS2Q5ST30 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
VARS2Q5ST30 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VARS2Q5ST30 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
VARS2Q5ST30 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.12■□□□□ 0.17
VARS2Q5ST30 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
VARS2Q5ST30 AC087481.3-201ENST00000602886 1894 ntBASIC16.12■□□□□ 0.17
VARS2Q5ST30 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VARS2Q5ST30 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.12■□□□□ 0.17
VARS2Q5ST30 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VARS2Q5ST30 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
VARS2Q5ST30 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
VARS2Q5ST30 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.12■□□□□ 0.17
VARS2Q5ST30 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
VARS2Q5ST30 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VARS2Q5ST30 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
VARS2Q5ST30 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.12■□□□□ 0.17
VARS2Q5ST30 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
VARS2Q5ST30 SLC25A24P2-201ENST00000415059 510 ntBASIC16.12■□□□□ 0.17
VARS2Q5ST30 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.12■□□□□ 0.17
VARS2Q5ST30 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.12■□□□□ 0.17
VARS2Q5ST30 AL049829.1-201ENST00000465411 156 ntBASIC16.12■□□□□ 0.17
VARS2Q5ST30 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC16.12■□□□□ 0.17
VARS2Q5ST30 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.12■□□□□ 0.17
VARS2Q5ST30 AC104982.3-201ENST00000581995 514 ntBASIC16.12■□□□□ 0.17
VARS2Q5ST30 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC16.12■□□□□ 0.17
VARS2Q5ST30 AC138466.3-201ENST00000619983 221 ntBASIC16.12■□□□□ 0.17
VARS2Q5ST30 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VARS2Q5ST30 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VARS2Q5ST30 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
VARS2Q5ST30 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VARS2Q5ST30 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.12■□□□□ 0.17
VARS2Q5ST30 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
VARS2Q5ST30 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.12■□□□□ 0.17
VARS2Q5ST30 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.12■□□□□ 0.17
VARS2Q5ST30 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.12■□□□□ 0.17
VARS2Q5ST30 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
VARS2Q5ST30 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VARS2Q5ST30 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
VARS2Q5ST30 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VARS2Q5ST30 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VARS2Q5ST30 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VARS2Q5ST30 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.12■□□□□ 0.17
VARS2Q5ST30 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VARS2Q5ST30 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.12■□□□□ 0.17
VARS2Q5ST30 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VARS2Q5ST30 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VARS2Q5ST30 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
VARS2Q5ST30 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VARS2Q5ST30 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.12■□□□□ 0.17
VARS2Q5ST30 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
VARS2Q5ST30 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VARS2Q5ST30 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VARS2Q5ST30 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VARS2Q5ST30 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VARS2Q5ST30 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VARS2Q5ST30 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.11■□□□□ 0.17
VARS2Q5ST30 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
VARS2Q5ST30 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
VARS2Q5ST30 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms