Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2B3Q16720 CICP4-201ENST00000447359 2812 ntBASIC18.66■□□□□ 0.58
ATP2B3Q16720 AC055811.4-201ENST00000624039 1754 ntBASIC18.66■□□□□ 0.58
ATP2B3Q16720 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2B3Q16720 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2B3Q16720 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.66■□□□□ 0.58
ATP2B3Q16720 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2B3Q16720 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2B3Q16720 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2B3Q16720 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2B3Q16720 CD8B2-202ENST00000417670 633 ntBASIC18.66■□□□□ 0.58
ATP2B3Q16720 OLR1-203ENST00000432556 950 ntTSL 2 BASIC18.66■□□□□ 0.58
ATP2B3Q16720 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC18.66■□□□□ 0.58
ATP2B3Q16720 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2B3Q16720 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC18.66■□□□□ 0.58
ATP2B3Q16720 DUX4L47-201ENST00000566374 394 ntBASIC18.66■□□□□ 0.58
ATP2B3Q16720 DUX4L45-201ENST00000566406 1057 ntBASIC18.66■□□□□ 0.58
ATP2B3Q16720 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC18.66■□□□□ 0.58
ATP2B3Q16720 AC010328.2-201ENST00000597698 1111 ntBASIC18.66■□□□□ 0.58
ATP2B3Q16720 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC18.66■□□□□ 0.58
ATP2B3Q16720 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.66■□□□□ 0.58
ATP2B3Q16720 MIR6799-201ENST00000620297 69 ntBASIC18.66■□□□□ 0.58
ATP2B3Q16720 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.66■□□□□ 0.58
ATP2B3Q16720 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2B3Q16720 TUBB1P2-201ENST00000422712 1306 ntBASIC18.66■□□□□ 0.58
ATP2B3Q16720 TUBB1P1-201ENST00000503144 1300 ntBASIC18.66■□□□□ 0.58
ATP2B3Q16720 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2B3Q16720 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2B3Q16720 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.66■□□□□ 0.58
ATP2B3Q16720 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2B3Q16720 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2B3Q16720 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
ATP2B3Q16720 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B3Q16720 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B3Q16720 AC012508.2-201ENST00000567613 1472 ntBASIC18.65■□□□□ 0.58
ATP2B3Q16720 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC18.65■□□□□ 0.58
ATP2B3Q16720 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B3Q16720 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.65■□□□□ 0.58
ATP2B3Q16720 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B3Q16720 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B3Q16720 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B3Q16720 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.65■□□□□ 0.58
ATP2B3Q16720 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B3Q16720 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
ATP2B3Q16720 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC18.65■□□□□ 0.58
ATP2B3Q16720 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC18.65■□□□□ 0.58
ATP2B3Q16720 AC245100.3-201ENST00000441281 285 ntBASIC18.65■□□□□ 0.58
ATP2B3Q16720 AL355994.2-201ENST00000447882 704 ntBASIC18.65■□□□□ 0.58
ATP2B3Q16720 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC18.65■□□□□ 0.58
ATP2B3Q16720 PFN2-215ENST00000497148 743 ntTSL 4 BASIC18.65■□□□□ 0.58
ATP2B3Q16720 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B3Q16720 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC18.65■□□□□ 0.58
ATP2B3Q16720 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B3Q16720 HNRNPA1P48-202ENST00000565308 961 ntBASIC18.65■□□□□ 0.58
ATP2B3Q16720 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC18.65■□□□□ 0.58
ATP2B3Q16720 AL603764.1-201ENST00000636452 321 ntBASIC18.65■□□□□ 0.58
ATP2B3Q16720 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC18.65■□□□□ 0.58
ATP2B3Q16720 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B3Q16720 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B3Q16720 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC18.65■□□□□ 0.58
ATP2B3Q16720 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
ATP2B3Q16720 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B3Q16720 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B3Q16720 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B3Q16720 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B3Q16720 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ATP2B3Q16720 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B3Q16720 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ATP2B3Q16720 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC18.65■□□□□ 0.58
ATP2B3Q16720 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC18.65■□□□□ 0.58
ATP2B3Q16720 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
ATP2B3Q16720 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B3Q16720 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
ATP2B3Q16720 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC18.65■□□□□ 0.58
ATP2B3Q16720 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ATP2B3Q16720 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B3Q16720 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.58
ATP2B3Q16720 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
ATP2B3Q16720 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
ATP2B3Q16720 AC023024.2-201ENST00000623561 1993 ntBASIC18.64■□□□□ 0.58
ATP2B3Q16720 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ATP2B3Q16720 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
ATP2B3Q16720 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ATP2B3Q16720 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2B3Q16720 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2B3Q16720 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2B3Q16720 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2B3Q16720 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2B3Q16720 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2B3Q16720 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC18.64■□□□□ 0.57
ATP2B3Q16720 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ATP2B3Q16720 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2B3Q16720 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2B3Q16720 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2B3Q16720 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
ATP2B3Q16720 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2B3Q16720 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2B3Q16720 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2B3Q16720 MIR1908-201ENST00000410394 80 ntBASIC18.64■□□□□ 0.57
ATP2B3Q16720 POM121L8P-201ENST00000417732 1281 ntBASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms