Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CGNL1Q0VF96 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC20.55■□□□□ 0.88
CGNL1Q0VF96 MTX1P1-201ENST00000440904 838 ntBASIC20.55■□□□□ 0.88
CGNL1Q0VF96 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC20.55■□□□□ 0.88
CGNL1Q0VF96 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC20.55■□□□□ 0.88
CGNL1Q0VF96 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC20.55■□□□□ 0.88
CGNL1Q0VF96 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC20.55■□□□□ 0.88
CGNL1Q0VF96 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC20.55■□□□□ 0.88
CGNL1Q0VF96 KLK3-211ENST00000597483 810 ntTSL 2 BASIC20.55■□□□□ 0.88
CGNL1Q0VF96 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC20.55■□□□□ 0.88
CGNL1Q0VF96 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CGNL1Q0VF96 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CGNL1Q0VF96 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC20.55■□□□□ 0.88
CGNL1Q0VF96 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CGNL1Q0VF96 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CGNL1Q0VF96 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CGNL1Q0VF96 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC20.55■□□□□ 0.88
CGNL1Q0VF96 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CGNL1Q0VF96 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CGNL1Q0VF96 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CGNL1Q0VF96 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CGNL1Q0VF96 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CGNL1Q0VF96 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CGNL1Q0VF96 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CGNL1Q0VF96 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC20.55■□□□□ 0.88
CGNL1Q0VF96 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
CGNL1Q0VF96 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CGNL1Q0VF96 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC20.55■□□□□ 0.88
CGNL1Q0VF96 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CGNL1Q0VF96 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CGNL1Q0VF96 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CGNL1Q0VF96 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CGNL1Q0VF96 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CGNL1Q0VF96 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CGNL1Q0VF96 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CGNL1Q0VF96 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC20.54■□□□□ 0.88
CGNL1Q0VF96 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CGNL1Q0VF96 RPSAP36-202ENST00000494591 1261 ntBASIC20.54■□□□□ 0.88
CGNL1Q0VF96 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC20.54■□□□□ 0.88
CGNL1Q0VF96 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC20.54■□□□□ 0.88
CGNL1Q0VF96 AC138696.2-201ENST00000607376 223 ntBASIC20.54■□□□□ 0.88
CGNL1Q0VF96 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CGNL1Q0VF96 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CGNL1Q0VF96 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CGNL1Q0VF96 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CGNL1Q0VF96 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CGNL1Q0VF96 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CGNL1Q0VF96 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CGNL1Q0VF96 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
CGNL1Q0VF96 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CGNL1Q0VF96 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CGNL1Q0VF96 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC20.54■□□□□ 0.88
CGNL1Q0VF96 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CGNL1Q0VF96 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC20.54■□□□□ 0.88
CGNL1Q0VF96 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CGNL1Q0VF96 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
CGNL1Q0VF96 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CGNL1Q0VF96 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CGNL1Q0VF96 FKBP4P6-201ENST00000457486 1332 ntBASIC20.54■□□□□ 0.88
CGNL1Q0VF96 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CGNL1Q0VF96 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CGNL1Q0VF96 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC20.54■□□□□ 0.88
CGNL1Q0VF96 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CGNL1Q0VF96 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CGNL1Q0VF96 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 AL136309.1-201ENST00000403917 691 ntBASIC20.53■□□□□ 0.88
CGNL1Q0VF96 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 NCK2-206ENST00000522586 490 ntTSL 5 BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 AC073347.1-201ENST00000421633 2643 ntBASIC20.53■□□□□ 0.88
CGNL1Q0VF96 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 AL596257.1-201ENST00000641463 2694 ntBASIC20.53■□□□□ 0.88
CGNL1Q0VF96 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CGNL1Q0VF96 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms