Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.61□□□□□ -0.23
EFNB1P98172 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
EFNB1P98172 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
EFNB1P98172 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
EFNB1P98172 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.61□□□□□ -0.23
EFNB1P98172 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.61□□□□□ -0.23
EFNB1P98172 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.61□□□□□ -0.23
EFNB1P98172 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
EFNB1P98172 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
EFNB1P98172 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.61□□□□□ -0.23
EFNB1P98172 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
EFNB1P98172 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
EFNB1P98172 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
EFNB1P98172 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
EFNB1P98172 C8orf49-201ENST00000525043 1968 ntBASIC13.61□□□□□ -0.23
EFNB1P98172 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
EFNB1P98172 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
EFNB1P98172 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.61□□□□□ -0.23
EFNB1P98172 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
EFNB1P98172 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
EFNB1P98172 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
EFNB1P98172 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
EFNB1P98172 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
EFNB1P98172 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.6□□□□□ -0.23
EFNB1P98172 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
EFNB1P98172 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
EFNB1P98172 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
EFNB1P98172 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
EFNB1P98172 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
EFNB1P98172 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
EFNB1P98172 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.6□□□□□ -0.23
EFNB1P98172 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
EFNB1P98172 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
EFNB1P98172 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
EFNB1P98172 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
EFNB1P98172 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
EFNB1P98172 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.6□□□□□ -0.23
EFNB1P98172 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.6□□□□□ -0.23
EFNB1P98172 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
EFNB1P98172 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
EFNB1P98172 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.6□□□□□ -0.23
EFNB1P98172 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
EFNB1P98172 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
EFNB1P98172 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
EFNB1P98172 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
EFNB1P98172 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
EFNB1P98172 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
EFNB1P98172 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
EFNB1P98172 KRT8P14-201ENST00000414254 1442 ntBASIC13.6□□□□□ -0.23
EFNB1P98172 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.6□□□□□ -0.23
EFNB1P98172 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
EFNB1P98172 POLD2P1-201ENST00000511220 997 ntBASIC13.6□□□□□ -0.23
EFNB1P98172 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
EFNB1P98172 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.6□□□□□ -0.23
EFNB1P98172 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.6□□□□□ -0.23
EFNB1P98172 KRT8P22-201ENST00000562317 1415 ntBASIC13.6□□□□□ -0.23
EFNB1P98172 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
EFNB1P98172 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
EFNB1P98172 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
EFNB1P98172 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
EFNB1P98172 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.6□□□□□ -0.23
EFNB1P98172 AL109936.8-201ENST00000641772 604 ntBASIC13.6□□□□□ -0.23
EFNB1P98172 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
EFNB1P98172 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
EFNB1P98172 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.6□□□□□ -0.23
EFNB1P98172 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
EFNB1P98172 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
EFNB1P98172 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
EFNB1P98172 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
EFNB1P98172 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
EFNB1P98172 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
EFNB1P98172 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
EFNB1P98172 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
EFNB1P98172 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
EFNB1P98172 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.59□□□□□ -0.23
EFNB1P98172 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
EFNB1P98172 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.59□□□□□ -0.23
EFNB1P98172 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
EFNB1P98172 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
EFNB1P98172 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.59□□□□□ -0.23
EFNB1P98172 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.59□□□□□ -0.23
EFNB1P98172 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
EFNB1P98172 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
EFNB1P98172 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
EFNB1P98172 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
EFNB1P98172 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
EFNB1P98172 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.59□□□□□ -0.23
EFNB1P98172 AL645937.2-201ENST00000396808 931 ntBASIC13.59□□□□□ -0.23
EFNB1P98172 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
EFNB1P98172 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.59□□□□□ -0.23
EFNB1P98172 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.59□□□□□ -0.23
EFNB1P98172 AL391069.4-201ENST00000609583 481 ntBASIC13.59□□□□□ -0.23
EFNB1P98172 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
EFNB1P98172 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
EFNB1P98172 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.59□□□□□ -0.23
EFNB1P98172 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.59□□□□□ -0.23
EFNB1P98172 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
EFNB1P98172 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.59□□□□□ -0.23
EFNB1P98172 AC015818.8-201ENST00000587907 1519 ntBASIC13.59□□□□□ -0.23
EFNB1P98172 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms