Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
ACTBP60709 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
ACTBP60709 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.19□□□□□ -0.3
ACTBP60709 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ACTBP60709 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ACTBP60709 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ACTBP60709 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
ACTBP60709 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ACTBP60709 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.19□□□□□ -0.3
ACTBP60709 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ACTBP60709 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
ACTBP60709 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.18□□□□□ -0.3
ACTBP60709 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ACTBP60709 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
ACTBP60709 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
ACTBP60709 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ACTBP60709 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.18□□□□□ -0.3
ACTBP60709 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.18□□□□□ -0.3
ACTBP60709 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ACTBP60709 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ACTBP60709 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ACTBP60709 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
ACTBP60709 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
ACTBP60709 AC018442.1-201ENST00000421439 2061 ntBASIC13.18□□□□□ -0.3
ACTBP60709 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
ACTBP60709 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
ACTBP60709 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.18□□□□□ -0.3
ACTBP60709 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
ACTBP60709 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.18□□□□□ -0.3
ACTBP60709 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.18□□□□□ -0.3
ACTBP60709 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.18□□□□□ -0.3
ACTBP60709 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.18□□□□□ -0.3
ACTBP60709 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ACTBP60709 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.18□□□□□ -0.3
ACTBP60709 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.18□□□□□ -0.3
ACTBP60709 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.18□□□□□ -0.3
ACTBP60709 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
ACTBP60709 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ACTBP60709 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
ACTBP60709 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
ACTBP60709 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
ACTBP60709 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
ACTBP60709 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
ACTBP60709 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
ACTBP60709 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ACTBP60709 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
ACTBP60709 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ACTBP60709 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
ACTBP60709 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
ACTBP60709 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ACTBP60709 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ACTBP60709 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.18□□□□□ -0.3
ACTBP60709 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.18□□□□□ -0.3
ACTBP60709 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ACTBP60709 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ACTBP60709 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ACTBP60709 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ACTBP60709 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ACTBP60709 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ACTBP60709 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ACTBP60709 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ACTBP60709 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ACTBP60709 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ACTBP60709 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ACTBP60709 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ACTBP60709 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ACTBP60709 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ACTBP60709 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ACTBP60709 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ACTBP60709 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ACTBP60709 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.17□□□□□ -0.3
ACTBP60709 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ACTBP60709 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
ACTBP60709 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.17□□□□□ -0.3
ACTBP60709 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ACTBP60709 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ACTBP60709 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.17□□□□□ -0.3
ACTBP60709 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ACTBP60709 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ACTBP60709 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ACTBP60709 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.17□□□□□ -0.3
ACTBP60709 YBX2P1-201ENST00000394192 760 ntBASIC13.17□□□□□ -0.3
ACTBP60709 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.17□□□□□ -0.3
ACTBP60709 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.17□□□□□ -0.3
ACTBP60709 AL671277.1-201ENST00000429656 993 ntBASIC13.17□□□□□ -0.3
ACTBP60709 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ACTBP60709 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
ACTBP60709 RNA5SP410-201ENST00000516285 106 ntBASIC13.17□□□□□ -0.3
ACTBP60709 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.17□□□□□ -0.3
ACTBP60709 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.17□□□□□ -0.3
ACTBP60709 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.17□□□□□ -0.3
ACTBP60709 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.17□□□□□ -0.3
ACTBP60709 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.17□□□□□ -0.3
ACTBP60709 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.17□□□□□ -0.3
ACTBP60709 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ACTBP60709 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
ACTBP60709 AC026979.3-201ENST00000607315 403 ntBASIC13.17□□□□□ -0.3
ACTBP60709 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ACTBP60709 C20orf181-201ENST00000623918 480 ntBASIC13.17□□□□□ -0.3
ACTBP60709 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms