Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
GFRA1P56159 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GFRA1P56159 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GFRA1P56159 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GFRA1P56159 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
GFRA1P56159 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
GFRA1P56159 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GFRA1P56159 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
GFRA1P56159 FAM8A4P-201ENST00000435433 1213 ntBASIC13.61□□□□□ -0.23
GFRA1P56159 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.61□□□□□ -0.23
GFRA1P56159 MESTP3-201ENST00000503460 968 ntBASIC13.61□□□□□ -0.23
GFRA1P56159 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.61□□□□□ -0.23
GFRA1P56159 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.61□□□□□ -0.23
GFRA1P56159 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
GFRA1P56159 C2orf69P2-201ENST00000562032 1123 ntBASIC13.61□□□□□ -0.23
GFRA1P56159 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.61□□□□□ -0.23
GFRA1P56159 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.61□□□□□ -0.23
GFRA1P56159 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.61□□□□□ -0.23
GFRA1P56159 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.61□□□□□ -0.23
GFRA1P56159 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
GFRA1P56159 AC138466.3-201ENST00000619983 221 ntBASIC13.61□□□□□ -0.23
GFRA1P56159 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
GFRA1P56159 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.61□□□□□ -0.23
GFRA1P56159 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
GFRA1P56159 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GFRA1P56159 HYMAI-201ENST00000635591 3347 ntBASIC13.61□□□□□ -0.23
GFRA1P56159 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GFRA1P56159 AC007326.2-201ENST00000624224 7579 ntBASIC13.61□□□□□ -0.23
GFRA1P56159 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GFRA1P56159 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GFRA1P56159 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.61□□□□□ -0.23
GFRA1P56159 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GFRA1P56159 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
GFRA1P56159 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GFRA1P56159 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GFRA1P56159 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GFRA1P56159 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GFRA1P56159 CLUHP2-201ENST00000426660 1303 ntBASIC13.61□□□□□ -0.23
GFRA1P56159 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.61□□□□□ -0.23
GFRA1P56159 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GFRA1P56159 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GFRA1P56159 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.61□□□□□ -0.23
GFRA1P56159 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.61□□□□□ -0.23
GFRA1P56159 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.61□□□□□ -0.23
GFRA1P56159 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
GFRA1P56159 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GFRA1P56159 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GFRA1P56159 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
GFRA1P56159 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
GFRA1P56159 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
GFRA1P56159 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.6□□□□□ -0.23
GFRA1P56159 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
GFRA1P56159 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GFRA1P56159 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GFRA1P56159 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GFRA1P56159 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.6□□□□□ -0.23
GFRA1P56159 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GFRA1P56159 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GFRA1P56159 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GFRA1P56159 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
GFRA1P56159 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.6□□□□□ -0.23
GFRA1P56159 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.6□□□□□ -0.23
GFRA1P56159 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.6□□□□□ -0.23
GFRA1P56159 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.6□□□□□ -0.23
GFRA1P56159 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.6□□□□□ -0.23
GFRA1P56159 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.6□□□□□ -0.23
GFRA1P56159 FTLP10-202ENST00000505798 471 ntBASIC13.6□□□□□ -0.23
GFRA1P56159 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
GFRA1P56159 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.6□□□□□ -0.23
GFRA1P56159 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GFRA1P56159 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.6□□□□□ -0.23
GFRA1P56159 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.6□□□□□ -0.23
GFRA1P56159 AC010328.2-201ENST00000597698 1111 ntBASIC13.6□□□□□ -0.23
GFRA1P56159 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.6□□□□□ -0.23
GFRA1P56159 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
GFRA1P56159 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.6□□□□□ -0.23
GFRA1P56159 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC13.6□□□□□ -0.23
GFRA1P56159 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GFRA1P56159 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GFRA1P56159 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GFRA1P56159 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.6□□□□□ -0.23
GFRA1P56159 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
GFRA1P56159 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GFRA1P56159 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GFRA1P56159 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GFRA1P56159 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GFRA1P56159 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.6□□□□□ -0.23
GFRA1P56159 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GFRA1P56159 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GFRA1P56159 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.6□□□□□ -0.23
GFRA1P56159 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GFRA1P56159 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GFRA1P56159 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
GFRA1P56159 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
GFRA1P56159 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GFRA1P56159 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
GFRA1P56159 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GFRA1P56159 AC006486.2-201ENST00000624246 2199 ntBASIC13.59□□□□□ -0.23
GFRA1P56159 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
GFRA1P56159 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms