Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SUMO3P55854 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SUMO3P55854 AL359258.3-201ENST00000622910 2331 ntBASIC13.78□□□□□ -0.2
SUMO3P55854 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SUMO3P55854 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SUMO3P55854 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SUMO3P55854 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SUMO3P55854 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.78□□□□□ -0.2
SUMO3P55854 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SUMO3P55854 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.78□□□□□ -0.2
SUMO3P55854 NME2P1-201ENST00000426182 414 ntBASIC13.78□□□□□ -0.2
SUMO3P55854 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SUMO3P55854 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.78□□□□□ -0.2
SUMO3P55854 KRT17P7-201ENST00000451704 1104 ntBASIC13.78□□□□□ -0.2
SUMO3P55854 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SUMO3P55854 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.78□□□□□ -0.2
SUMO3P55854 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.78□□□□□ -0.2
SUMO3P55854 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
SUMO3P55854 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.78□□□□□ -0.2
SUMO3P55854 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.78□□□□□ -0.2
SUMO3P55854 LINC02084-201ENST00000606069 1096 ntBASIC13.78□□□□□ -0.2
SUMO3P55854 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
SUMO3P55854 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SUMO3P55854 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
SUMO3P55854 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.78□□□□□ -0.2
SUMO3P55854 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SUMO3P55854 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.78□□□□□ -0.2
SUMO3P55854 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SUMO3P55854 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.78□□□□□ -0.2
SUMO3P55854 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SUMO3P55854 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.78□□□□□ -0.2
SUMO3P55854 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SUMO3P55854 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SUMO3P55854 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SUMO3P55854 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SUMO3P55854 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SUMO3P55854 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SUMO3P55854 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SUMO3P55854 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SUMO3P55854 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
SUMO3P55854 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SUMO3P55854 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
SUMO3P55854 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SUMO3P55854 LINC00528-201ENST00000600723 2160 ntBASIC13.78□□□□□ -0.2
SUMO3P55854 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.78□□□□□ -0.2
SUMO3P55854 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.78□□□□□ -0.2
SUMO3P55854 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SUMO3P55854 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.78□□□□□ -0.2
SUMO3P55854 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SUMO3P55854 AJ011931.1-201ENST00000618749 2492 ntBASIC13.78□□□□□ -0.2
SUMO3P55854 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SUMO3P55854 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SUMO3P55854 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SUMO3P55854 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SUMO3P55854 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SUMO3P55854 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
SUMO3P55854 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SUMO3P55854 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
SUMO3P55854 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SUMO3P55854 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.2
SUMO3P55854 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.77□□□□□ -0.2
SUMO3P55854 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SUMO3P55854 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SUMO3P55854 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SUMO3P55854 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
SUMO3P55854 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SUMO3P55854 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SUMO3P55854 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.77□□□□□ -0.21
SUMO3P55854 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
SUMO3P55854 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
SUMO3P55854 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SUMO3P55854 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SUMO3P55854 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
SUMO3P55854 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.77□□□□□ -0.21
SUMO3P55854 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SUMO3P55854 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.77□□□□□ -0.21
SUMO3P55854 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SUMO3P55854 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.77□□□□□ -0.21
SUMO3P55854 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.77□□□□□ -0.21
SUMO3P55854 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.77□□□□□ -0.21
SUMO3P55854 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.77□□□□□ -0.21
SUMO3P55854 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.77□□□□□ -0.21
SUMO3P55854 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
SUMO3P55854 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SUMO3P55854 AP001889.1-201ENST00000525414 633 ntBASIC13.77□□□□□ -0.21
SUMO3P55854 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.77□□□□□ -0.21
SUMO3P55854 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.77□□□□□ -0.21
SUMO3P55854 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.77□□□□□ -0.21
SUMO3P55854 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.77□□□□□ -0.21
SUMO3P55854 RN7SL48P-201ENST00000579283 293 ntBASIC13.77□□□□□ -0.21
SUMO3P55854 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
SUMO3P55854 AC233724.13-201ENST00000598383 410 ntBASIC13.77□□□□□ -0.21
SUMO3P55854 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.77□□□□□ -0.21
SUMO3P55854 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SUMO3P55854 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SUMO3P55854 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SUMO3P55854 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.77□□□□□ -0.21
SUMO3P55854 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.77□□□□□ -0.21
SUMO3P55854 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SUMO3P55854 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms