Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCN3P51790 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCN3P51790 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCN3P51790 FKBP4P6-201ENST00000457486 1332 ntBASIC16.67■□□□□ 0.26
CLCN3P51790 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.67■□□□□ 0.26
CLCN3P51790 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCN3P51790 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLCN3P51790 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.67■□□□□ 0.26
CLCN3P51790 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCN3P51790 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCN3P51790 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCN3P51790 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.66■□□□□ 0.26
CLCN3P51790 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCN3P51790 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.66■□□□□ 0.26
CLCN3P51790 AC126365.1-201ENST00000578585 1514 ntBASIC16.66■□□□□ 0.26
CLCN3P51790 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCN3P51790 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCN3P51790 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCN3P51790 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.66■□□□□ 0.26
CLCN3P51790 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCN3P51790 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.66■□□□□ 0.26
CLCN3P51790 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCN3P51790 GPAA1P2-201ENST00000417923 928 ntBASIC16.66■□□□□ 0.26
CLCN3P51790 HSPB1P2-201ENST00000448722 546 ntBASIC16.66■□□□□ 0.26
CLCN3P51790 HIST2H2BB-201ENST00000449108 381 ntBASIC16.66■□□□□ 0.26
CLCN3P51790 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.66■□□□□ 0.26
CLCN3P51790 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CLCN3P51790 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CLCN3P51790 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16.66■□□□□ 0.26
CLCN3P51790 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC16.66■□□□□ 0.26
CLCN3P51790 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.66■□□□□ 0.26
CLCN3P51790 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.66■□□□□ 0.26
CLCN3P51790 AL022328.3-201ENST00000607943 679 ntBASIC16.66■□□□□ 0.26
CLCN3P51790 ZACNP1-201ENST00000612259 710 ntBASIC16.66■□□□□ 0.26
CLCN3P51790 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CLCN3P51790 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCN3P51790 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLCN3P51790 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.66■□□□□ 0.26
CLCN3P51790 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLCN3P51790 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCN3P51790 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CLCN3P51790 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLCN3P51790 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.66■□□□□ 0.26
CLCN3P51790 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCN3P51790 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.66■□□□□ 0.26
CLCN3P51790 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN3P51790 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN3P51790 AC018735.1-201ENST00000437208 1502 ntBASIC16.65■□□□□ 0.26
CLCN3P51790 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.65■□□□□ 0.26
CLCN3P51790 LILRP1-201ENST00000444199 1370 ntBASIC16.65■□□□□ 0.26
CLCN3P51790 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.65■□□□□ 0.26
CLCN3P51790 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN3P51790 INE2-201ENST00000630399 1874 ntBASIC16.65■□□□□ 0.26
CLCN3P51790 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.65■□□□□ 0.26
CLCN3P51790 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CLCN3P51790 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN3P51790 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN3P51790 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.65■□□□□ 0.26
CLCN3P51790 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN3P51790 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN3P51790 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN3P51790 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
CLCN3P51790 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CLCN3P51790 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CLCN3P51790 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN3P51790 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
CLCN3P51790 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN3P51790 AC079178.1-201ENST00000420915 656 ntBASIC16.65■□□□□ 0.26
CLCN3P51790 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.65■□□□□ 0.26
CLCN3P51790 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.65■□□□□ 0.26
CLCN3P51790 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.65■□□□□ 0.26
CLCN3P51790 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.65■□□□□ 0.26
CLCN3P51790 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN3P51790 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN3P51790 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CLCN3P51790 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN3P51790 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN3P51790 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.65■□□□□ 0.26
CLCN3P51790 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CLCN3P51790 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CLCN3P51790 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN3P51790 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.65■□□□□ 0.26
CLCN3P51790 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN3P51790 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CLCN3P51790 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN3P51790 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN3P51790 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN3P51790 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN3P51790 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
CLCN3P51790 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN3P51790 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.65■□□□□ 0.26
CLCN3P51790 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLCN3P51790 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.64■□□□□ 0.26
CLCN3P51790 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCN3P51790 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.64■□□□□ 0.25
CLCN3P51790 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCN3P51790 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CLCN3P51790 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLCN3P51790 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLCN3P51790 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 216 ms