Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SLC1A3P43003 AL391069.4-201ENST00000609583 481 ntBASIC14.08□□□□□ -0.16
SLC1A3P43003 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.08□□□□□ -0.16
SLC1A3P43003 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.08□□□□□ -0.16
SLC1A3P43003 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.08□□□□□ -0.16
SLC1A3P43003 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.08□□□□□ -0.16
SLC1A3P43003 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.08□□□□□ -0.16
SLC1A3P43003 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC1A3P43003 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SLC1A3P43003 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.08□□□□□ -0.16
SLC1A3P43003 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC1A3P43003 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC1A3P43003 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
SLC1A3P43003 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SLC1A3P43003 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC1A3P43003 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC1A3P43003 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC1A3P43003 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SLC1A3P43003 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SLC1A3P43003 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.08□□□□□ -0.16
SLC1A3P43003 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC1A3P43003 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A3P43003 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A3P43003 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SLC1A3P43003 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A3P43003 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A3P43003 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A3P43003 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A3P43003 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A3P43003 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A3P43003 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A3P43003 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A3P43003 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
SLC1A3P43003 CICP4-201ENST00000447359 2812 ntBASIC14.07□□□□□ -0.16
SLC1A3P43003 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A3P43003 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
SLC1A3P43003 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A3P43003 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.07□□□□□ -0.16
SLC1A3P43003 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SLC1A3P43003 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
SLC1A3P43003 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A3P43003 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A3P43003 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.07□□□□□ -0.16
SLC1A3P43003 MEP1AP4-201ENST00000423244 1087 ntBASIC14.07□□□□□ -0.16
SLC1A3P43003 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.07□□□□□ -0.16
SLC1A3P43003 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.07□□□□□ -0.16
SLC1A3P43003 DOC2GP-202ENST00000514950 1163 ntBASIC14.07□□□□□ -0.16
SLC1A3P43003 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SLC1A3P43003 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A3P43003 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A3P43003 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A3P43003 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A3P43003 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.07□□□□□ -0.16
SLC1A3P43003 CICP14-201ENST00000629111 2732 ntBASIC14.07□□□□□ -0.16
SLC1A3P43003 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A3P43003 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A3P43003 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A3P43003 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A3P43003 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SLC1A3P43003 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
SLC1A3P43003 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A3P43003 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
SLC1A3P43003 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A3P43003 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SLC1A3P43003 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A3P43003 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
SLC1A3P43003 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A3P43003 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A3P43003 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.07□□□□□ -0.16
SLC1A3P43003 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A3P43003 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A3P43003 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC1A3P43003 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SLC1A3P43003 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLC1A3P43003 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.06□□□□□ -0.16
SLC1A3P43003 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SLC1A3P43003 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLC1A3P43003 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SLC1A3P43003 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SLC1A3P43003 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SLC1A3P43003 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SLC1A3P43003 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.06□□□□□ -0.16
SLC1A3P43003 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC1A3P43003 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
SLC1A3P43003 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.06□□□□□ -0.16
SLC1A3P43003 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.06□□□□□ -0.16
SLC1A3P43003 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SLC1A3P43003 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC1A3P43003 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLC1A3P43003 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC1A3P43003 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC1A3P43003 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.06□□□□□ -0.16
SLC1A3P43003 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.06□□□□□ -0.16
SLC1A3P43003 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC1A3P43003 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC1A3P43003 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.06□□□□□ -0.16
SLC1A3P43003 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SLC1A3P43003 AC104457.1-201ENST00000401024 814 ntBASIC14.06□□□□□ -0.16
SLC1A3P43003 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.06□□□□□ -0.16
SLC1A3P43003 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms