Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 MIR4538-201ENST00000581377 78 ntBASIC14.02□□□□□ -0.17
RFC3P40938 RN7SL219P-201ENST00000582872 296 ntBASIC14.02□□□□□ -0.17
RFC3P40938 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.02□□□□□ -0.17
RFC3P40938 AC145423.3-201ENST00000615987 467 ntBASIC14.02□□□□□ -0.17
RFC3P40938 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.02□□□□□ -0.17
RFC3P40938 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RFC3P40938 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RFC3P40938 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.02□□□□□ -0.17
RFC3P40938 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.02□□□□□ -0.17
RFC3P40938 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RFC3P40938 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RFC3P40938 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RFC3P40938 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RFC3P40938 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.02□□□□□ -0.17
RFC3P40938 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RFC3P40938 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RFC3P40938 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.01□□□□□ -0.17
RFC3P40938 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.01□□□□□ -0.17
RFC3P40938 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RFC3P40938 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RFC3P40938 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RFC3P40938 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.01□□□□□ -0.17
RFC3P40938 TNRC18P2-201ENST00000417666 2714 ntBASIC14.01□□□□□ -0.17
RFC3P40938 AC084364.1-201ENST00000551967 1556 ntBASIC14.01□□□□□ -0.17
RFC3P40938 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RFC3P40938 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RFC3P40938 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
RFC3P40938 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.01□□□□□ -0.17
RFC3P40938 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.01□□□□□ -0.17
RFC3P40938 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RFC3P40938 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.01□□□□□ -0.17
RFC3P40938 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RFC3P40938 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RFC3P40938 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.01□□□□□ -0.17
RFC3P40938 KRT8P35-201ENST00000483942 1338 ntBASIC14.01□□□□□ -0.17
RFC3P40938 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RFC3P40938 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RFC3P40938 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RFC3P40938 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RFC3P40938 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RFC3P40938 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
RFC3P40938 ACKR1-201ENST00000368121 1240 ntBASIC14.01□□□□□ -0.17
RFC3P40938 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.01□□□□□ -0.17
RFC3P40938 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RFC3P40938 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
RFC3P40938 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.01□□□□□ -0.17
RFC3P40938 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.01□□□□□ -0.17
RFC3P40938 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RFC3P40938 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
RFC3P40938 AL590640.2-201ENST00000457038 527 ntBASIC14.01□□□□□ -0.17
RFC3P40938 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.01□□□□□ -0.17
RFC3P40938 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.01□□□□□ -0.17
RFC3P40938 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RFC3P40938 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RFC3P40938 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.01□□□□□ -0.17
RFC3P40938 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.01□□□□□ -0.17
RFC3P40938 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.01□□□□□ -0.17
RFC3P40938 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.01□□□□□ -0.17
RFC3P40938 AP005019.2-201ENST00000615104 511 ntBASIC14.01□□□□□ -0.17
RFC3P40938 AC009542.2-202ENST00000619004 1067 ntBASIC14.01□□□□□ -0.17
RFC3P40938 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
RFC3P40938 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.01□□□□□ -0.17
RFC3P40938 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RFC3P40938 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RFC3P40938 AC067930.6-201ENST00000623257 4947 ntBASIC14.01□□□□□ -0.17
RFC3P40938 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RFC3P40938 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.01□□□□□ -0.17
RFC3P40938 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.01□□□□□ -0.17
RFC3P40938 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RFC3P40938 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RFC3P40938 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RFC3P40938 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RFC3P40938 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RFC3P40938 AC006058.4-201ENST00000624016 1670 ntBASIC14.01□□□□□ -0.17
RFC3P40938 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RFC3P40938 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RFC3P40938 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14□□□□□ -0.17
RFC3P40938 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
RFC3P40938 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RFC3P40938 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14□□□□□ -0.17
RFC3P40938 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RFC3P40938 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RFC3P40938 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14□□□□□ -0.17
RFC3P40938 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RFC3P40938 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14□□□□□ -0.17
RFC3P40938 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14□□□□□ -0.17
RFC3P40938 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RFC3P40938 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
RFC3P40938 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RFC3P40938 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14□□□□□ -0.17
RFC3P40938 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14□□□□□ -0.17
RFC3P40938 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
RFC3P40938 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RFC3P40938 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14□□□□□ -0.17
RFC3P40938 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14□□□□□ -0.17
RFC3P40938 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14□□□□□ -0.17
RFC3P40938 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
RFC3P40938 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14□□□□□ -0.17
RFC3P40938 FAM21FP-201ENST00000426241 1131 ntBASIC14□□□□□ -0.17
RFC3P40938 FAM197Y7-201ENST00000432892 766 ntBASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms