Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TM4SF1P30408 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.57■□□□□ 0.56
TM4SF1P30408 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
TM4SF1P30408 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TM4SF1P30408 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TM4SF1P30408 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TM4SF1P30408 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TM4SF1P30408 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TM4SF1P30408 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
TM4SF1P30408 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TM4SF1P30408 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.56■□□□□ 0.56
TM4SF1P30408 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC18.56■□□□□ 0.56
TM4SF1P30408 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TM4SF1P30408 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TM4SF1P30408 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC18.56■□□□□ 0.56
TM4SF1P30408 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TM4SF1P30408 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.56■□□□□ 0.56
TM4SF1P30408 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TM4SF1P30408 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TM4SF1P30408 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TM4SF1P30408 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TM4SF1P30408 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TM4SF1P30408 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TM4SF1P30408 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC18.56■□□□□ 0.56
TM4SF1P30408 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TM4SF1P30408 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC18.56■□□□□ 0.56
TM4SF1P30408 LYPLA2P1-203ENST00000447689 696 ntBASIC18.56■□□□□ 0.56
TM4SF1P30408 DUTP3-201ENST00000450025 415 ntBASIC18.56■□□□□ 0.56
TM4SF1P30408 AL035414.1-201ENST00000451327 857 ntBASIC18.56■□□□□ 0.56
TM4SF1P30408 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TM4SF1P30408 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC18.56■□□□□ 0.56
TM4SF1P30408 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
TM4SF1P30408 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC18.56■□□□□ 0.56
TM4SF1P30408 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC18.56■□□□□ 0.56
TM4SF1P30408 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC18.56■□□□□ 0.56
TM4SF1P30408 CMC2-224ENST00000630396 481 ntTSL 5 BASIC18.56■□□□□ 0.56
TM4SF1P30408 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TM4SF1P30408 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC18.56■□□□□ 0.56
TM4SF1P30408 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TM4SF1P30408 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.56■□□□□ 0.56
TM4SF1P30408 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TM4SF1P30408 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TM4SF1P30408 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
TM4SF1P30408 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
TM4SF1P30408 KRT8P31-201ENST00000504812 1408 ntBASIC18.56■□□□□ 0.56
TM4SF1P30408 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TM4SF1P30408 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TM4SF1P30408 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TM4SF1P30408 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TM4SF1P30408 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
TM4SF1P30408 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TM4SF1P30408 LILRP1-201ENST00000444199 1370 ntBASIC18.55■□□□□ 0.56
TM4SF1P30408 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC18.55■□□□□ 0.56
TM4SF1P30408 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TM4SF1P30408 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TM4SF1P30408 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.55■□□□□ 0.56
TM4SF1P30408 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TM4SF1P30408 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TM4SF1P30408 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TM4SF1P30408 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TM4SF1P30408 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.55■□□□□ 0.56
TM4SF1P30408 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC18.55■□□□□ 0.56
TM4SF1P30408 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC18.55■□□□□ 0.56
TM4SF1P30408 AL807761.2-201ENST00000422849 729 ntBASIC18.55■□□□□ 0.56
TM4SF1P30408 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TM4SF1P30408 AC018463.1-201ENST00000456674 917 ntBASIC18.55■□□□□ 0.56
TM4SF1P30408 GCOM2-201ENST00000509133 1104 ntBASIC18.55■□□□□ 0.56
TM4SF1P30408 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC18.55■□□□□ 0.56
TM4SF1P30408 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC18.55■□□□□ 0.56
TM4SF1P30408 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
TM4SF1P30408 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC18.55■□□□□ 0.56
TM4SF1P30408 AC093752.3-201ENST00000567343 901 ntBASIC18.55■□□□□ 0.56
TM4SF1P30408 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC18.55■□□□□ 0.56
TM4SF1P30408 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TM4SF1P30408 AP001184.1-201ENST00000637936 376 ntBASIC18.55■□□□□ 0.56
TM4SF1P30408 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.55■□□□□ 0.56
TM4SF1P30408 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TM4SF1P30408 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TM4SF1P30408 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TM4SF1P30408 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TM4SF1P30408 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TM4SF1P30408 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TM4SF1P30408 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC18.55■□□□□ 0.56
TM4SF1P30408 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TM4SF1P30408 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.55■□□□□ 0.56
TM4SF1P30408 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TM4SF1P30408 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
TM4SF1P30408 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TM4SF1P30408 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TM4SF1P30408 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.55■□□□□ 0.56
TM4SF1P30408 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TM4SF1P30408 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.55■□□□□ 0.56
TM4SF1P30408 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TM4SF1P30408 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TM4SF1P30408 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TM4SF1P30408 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
TM4SF1P30408 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
TM4SF1P30408 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TM4SF1P30408 PRAL-201ENST00000624952 3286 ntBASIC18.54■□□□□ 0.56
TM4SF1P30408 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms