Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CD40P25942 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.12□□□□□ -0.31
CD40P25942 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CD40P25942 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CD40P25942 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.12□□□□□ -0.31
CD40P25942 AL157414.3-201ENST00000624276 1954 ntBASIC13.12□□□□□ -0.31
CD40P25942 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD40P25942 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CD40P25942 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD40P25942 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CD40P25942 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.12□□□□□ -0.31
CD40P25942 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.12□□□□□ -0.31
CD40P25942 AC136621.1-201ENST00000624017 2304 ntBASIC13.12□□□□□ -0.31
CD40P25942 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CD40P25942 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
CD40P25942 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD40P25942 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD40P25942 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CD40P25942 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD40P25942 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD40P25942 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD40P25942 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CD40P25942 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CD40P25942 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.12□□□□□ -0.31
CD40P25942 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CD40P25942 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
CD40P25942 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.12□□□□□ -0.31
CD40P25942 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CD40P25942 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.12□□□□□ -0.31
CD40P25942 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.12□□□□□ -0.31
CD40P25942 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC13.12□□□□□ -0.31
CD40P25942 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.12□□□□□ -0.31
CD40P25942 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CD40P25942 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CD40P25942 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.12□□□□□ -0.31
CD40P25942 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.12□□□□□ -0.31
CD40P25942 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.12□□□□□ -0.31
CD40P25942 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.12□□□□□ -0.31
CD40P25942 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.12□□□□□ -0.31
CD40P25942 DUX4L47-201ENST00000566374 394 ntBASIC13.12□□□□□ -0.31
CD40P25942 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.12□□□□□ -0.31
CD40P25942 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD40P25942 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC13.12□□□□□ -0.31
CD40P25942 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
CD40P25942 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CD40P25942 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD40P25942 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.12□□□□□ -0.31
CD40P25942 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD40P25942 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD40P25942 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CD40P25942 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CD40P25942 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CD40P25942 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CD40P25942 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD40P25942 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD40P25942 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD40P25942 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CD40P25942 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CD40P25942 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD40P25942 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
CD40P25942 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.12□□□□□ -0.31
CD40P25942 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CD40P25942 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.12□□□□□ -0.31
CD40P25942 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD40P25942 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.12□□□□□ -0.31
CD40P25942 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CD40P25942 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CD40P25942 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.12□□□□□ -0.31
CD40P25942 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CD40P25942 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CD40P25942 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD40P25942 SSR4P1-203ENST00000599569 2260 ntBASIC13.11□□□□□ -0.31
CD40P25942 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.11□□□□□ -0.31
CD40P25942 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CD40P25942 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CD40P25942 C18orf15-201ENST00000623680 2534 ntBASIC13.11□□□□□ -0.31
CD40P25942 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD40P25942 MST1L-201ENST00000442552 2185 ntBASIC13.11□□□□□ -0.31
CD40P25942 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD40P25942 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD40P25942 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CD40P25942 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.11□□□□□ -0.31
CD40P25942 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.11□□□□□ -0.31
CD40P25942 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CD40P25942 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.11□□□□□ -0.31
CD40P25942 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CD40P25942 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.11□□□□□ -0.31
CD40P25942 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CD40P25942 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.11□□□□□ -0.31
CD40P25942 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD40P25942 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD40P25942 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD40P25942 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CD40P25942 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD40P25942 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.11□□□□□ -0.31
CD40P25942 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CD40P25942 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
CD40P25942 POM121L8P-201ENST00000417732 1281 ntBASIC13.11□□□□□ -0.31
CD40P25942 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CD40P25942 FAM8A4P-201ENST00000435433 1213 ntBASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms