Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
MSR1P21757 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.52□□□□□ -0.24
MSR1P21757 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.52□□□□□ -0.24
MSR1P21757 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
MSR1P21757 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
MSR1P21757 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
MSR1P21757 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.52□□□□□ -0.25
MSR1P21757 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MSR1P21757 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
MSR1P21757 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MSR1P21757 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
MSR1P21757 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.52□□□□□ -0.25
MSR1P21757 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.52□□□□□ -0.25
MSR1P21757 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
MSR1P21757 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.52□□□□□ -0.25
MSR1P21757 GNAQP1-201ENST00000444815 1067 ntBASIC13.52□□□□□ -0.25
MSR1P21757 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.52□□□□□ -0.25
MSR1P21757 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.52□□□□□ -0.25
MSR1P21757 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.52□□□□□ -0.25
MSR1P21757 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.52□□□□□ -0.25
MSR1P21757 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.52□□□□□ -0.25
MSR1P21757 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.52□□□□□ -0.25
MSR1P21757 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.52□□□□□ -0.25
MSR1P21757 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
MSR1P21757 AC099568.2-201ENST00000609194 695 ntBASIC13.52□□□□□ -0.25
MSR1P21757 AJ011932.1-201ENST00000621707 465 ntBASIC13.52□□□□□ -0.25
MSR1P21757 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MSR1P21757 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
MSR1P21757 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MSR1P21757 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
MSR1P21757 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
MSR1P21757 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MSR1P21757 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
MSR1P21757 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
MSR1P21757 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
MSR1P21757 ACE3P-201ENST00000423435 1973 ntBASIC13.52□□□□□ -0.25
MSR1P21757 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MSR1P21757 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
MSR1P21757 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.52□□□□□ -0.25
MSR1P21757 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MSR1P21757 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.52□□□□□ -0.25
MSR1P21757 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
MSR1P21757 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MSR1P21757 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.52□□□□□ -0.25
MSR1P21757 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MSR1P21757 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
MSR1P21757 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
MSR1P21757 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MSR1P21757 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MSR1P21757 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MSR1P21757 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
MSR1P21757 AJ011931.1-201ENST00000618749 2492 ntBASIC13.51□□□□□ -0.25
MSR1P21757 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.51□□□□□ -0.25
MSR1P21757 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MSR1P21757 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MSR1P21757 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MSR1P21757 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MSR1P21757 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.51□□□□□ -0.25
MSR1P21757 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MSR1P21757 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MSR1P21757 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MSR1P21757 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MSR1P21757 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MSR1P21757 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MSR1P21757 DRD5P1-201ENST00000456605 1438 ntBASIC13.51□□□□□ -0.25
MSR1P21757 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.51□□□□□ -0.25
MSR1P21757 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MSR1P21757 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
MSR1P21757 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.51□□□□□ -0.25
MSR1P21757 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MSR1P21757 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MSR1P21757 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.51□□□□□ -0.25
MSR1P21757 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MSR1P21757 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.51□□□□□ -0.25
MSR1P21757 AC104596.2-201ENST00000512793 793 ntBASIC13.51□□□□□ -0.25
MSR1P21757 AC026410.3-201ENST00000514280 936 ntBASIC13.51□□□□□ -0.25
MSR1P21757 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.51□□□□□ -0.25
MSR1P21757 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
MSR1P21757 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.51□□□□□ -0.25
MSR1P21757 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.51□□□□□ -0.25
MSR1P21757 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.51□□□□□ -0.25
MSR1P21757 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.51□□□□□ -0.25
MSR1P21757 AC107373.2-201ENST00000607735 490 ntBASIC13.51□□□□□ -0.25
MSR1P21757 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
MSR1P21757 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.51□□□□□ -0.25
MSR1P21757 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
MSR1P21757 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MSR1P21757 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MSR1P21757 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MSR1P21757 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MSR1P21757 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.51□□□□□ -0.25
MSR1P21757 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
MSR1P21757 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
MSR1P21757 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MSR1P21757 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MSR1P21757 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MSR1P21757 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.51□□□□□ -0.25
MSR1P21757 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MSR1P21757 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MSR1P21757 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms