Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 RPL37AP1-201ENST00000412502 279 ntBASIC13.59□□□□□ -0.23
APOC1P02654 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.59□□□□□ -0.23
APOC1P02654 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.59□□□□□ -0.23
APOC1P02654 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.59□□□□□ -0.23
APOC1P02654 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.59□□□□□ -0.23
APOC1P02654 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.59□□□□□ -0.23
APOC1P02654 AC069120.2-201ENST00000524091 540 ntBASIC13.59□□□□□ -0.23
APOC1P02654 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APOC1P02654 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.59□□□□□ -0.23
APOC1P02654 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.59□□□□□ -0.23
APOC1P02654 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
APOC1P02654 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
APOC1P02654 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.59□□□□□ -0.23
APOC1P02654 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
APOC1P02654 AC011467.4-201ENST00000594891 528 ntBASIC13.59□□□□□ -0.23
APOC1P02654 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APOC1P02654 AL596442.2-201ENST00000610240 980 ntBASIC13.59□□□□□ -0.23
APOC1P02654 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.59□□□□□ -0.23
APOC1P02654 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.59□□□□□ -0.23
APOC1P02654 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APOC1P02654 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.59□□□□□ -0.23
APOC1P02654 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOC1P02654 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
APOC1P02654 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOC1P02654 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
APOC1P02654 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
APOC1P02654 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
APOC1P02654 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.59□□□□□ -0.23
APOC1P02654 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.59□□□□□ -0.23
APOC1P02654 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.59□□□□□ -0.23
APOC1P02654 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
APOC1P02654 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
APOC1P02654 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.59□□□□□ -0.23
APOC1P02654 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
APOC1P02654 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
APOC1P02654 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
APOC1P02654 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
APOC1P02654 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.23
APOC1P02654 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
APOC1P02654 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
APOC1P02654 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
APOC1P02654 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.58□□□□□ -0.23
APOC1P02654 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.58□□□□□ -0.23
APOC1P02654 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
APOC1P02654 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.58□□□□□ -0.23
APOC1P02654 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
APOC1P02654 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
APOC1P02654 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
APOC1P02654 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOC1P02654 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
APOC1P02654 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOC1P02654 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOC1P02654 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
APOC1P02654 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
APOC1P02654 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOC1P02654 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
APOC1P02654 TOMM22P5-201ENST00000416399 439 ntBASIC13.58□□□□□ -0.24
APOC1P02654 GHSR-202ENST00000427970 912 ntBASIC13.58□□□□□ -0.24
APOC1P02654 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.58□□□□□ -0.24
APOC1P02654 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.58□□□□□ -0.24
APOC1P02654 DNAJB3-202ENST00000449667 1266 ntBASIC13.58□□□□□ -0.24
APOC1P02654 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
APOC1P02654 AC125807.1-201ENST00000483097 614 ntBASIC13.58□□□□□ -0.24
APOC1P02654 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.58□□□□□ -0.24
APOC1P02654 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.58□□□□□ -0.24
APOC1P02654 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.58□□□□□ -0.24
APOC1P02654 AC140878.1-201ENST00000565277 250 ntBASIC13.58□□□□□ -0.24
APOC1P02654 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.58□□□□□ -0.24
APOC1P02654 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.58□□□□□ -0.24
APOC1P02654 AC027612.4-201ENST00000605371 583 ntBASIC13.58□□□□□ -0.24
APOC1P02654 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
APOC1P02654 AC138969.3-201ENST00000546612 1459 ntBASIC13.58□□□□□ -0.24
APOC1P02654 AC138932.2-201ENST00000548268 1459 ntBASIC13.58□□□□□ -0.24
APOC1P02654 AC126755.4-201ENST00000549796 1459 ntBASIC13.58□□□□□ -0.24
APOC1P02654 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.58□□□□□ -0.24
APOC1P02654 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOC1P02654 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOC1P02654 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.58□□□□□ -0.24
APOC1P02654 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
APOC1P02654 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
APOC1P02654 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
APOC1P02654 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOC1P02654 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOC1P02654 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.58□□□□□ -0.24
APOC1P02654 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.58□□□□□ -0.24
APOC1P02654 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.58□□□□□ -0.24
APOC1P02654 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOC1P02654 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
APOC1P02654 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
APOC1P02654 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.58□□□□□ -0.24
APOC1P02654 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOC1P02654 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
APOC1P02654 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOC1P02654 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
APOC1P02654 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOC1P02654 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
APOC1P02654 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.58□□□□□ -0.24
APOC1P02654 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOC1P02654 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
APOC1P02654 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms