Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
PDGFBP01127 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
PDGFBP01127 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.08■□□□□ 0
PDGFBP01127 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.08■□□□□ 0
PDGFBP01127 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
PDGFBP01127 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PDGFBP01127 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PDGFBP01127 STK16-203ENST00000409516 895 ntTSL 2 BASIC15.08■□□□□ 0
PDGFBP01127 BANF1P3-201ENST00000412556 261 ntBASIC15.08■□□□□ 0
PDGFBP01127 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC15.08■□□□□ 0
PDGFBP01127 AL354861.1-201ENST00000445213 355 ntBASIC15.08■□□□□ 0
PDGFBP01127 RPSAP15-201ENST00000448168 861 ntBASIC15.08■□□□□ 0
PDGFBP01127 AREG-202ENST00000502307 956 ntTSL 5 BASIC15.08■□□□□ 0
PDGFBP01127 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.08■□□□□ 0
PDGFBP01127 RN7SL470P-201ENST00000583069 259 ntBASIC15.08■□□□□ 0
PDGFBP01127 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.08■□□□□ 0
PDGFBP01127 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC15.08■□□□□ 0
PDGFBP01127 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC15.08■□□□□ 0
PDGFBP01127 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC15.08■□□□□ 0
PDGFBP01127 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
PDGFBP01127 AC138466.5-201ENST00000624002 808 ntBASIC15.08■□□□□ 0
PDGFBP01127 CMC2-224ENST00000630396 481 ntTSL 5 BASIC15.08■□□□□ 0
PDGFBP01127 AL645728.2-202ENST00000641679 227 ntBASIC15.08■□□□□ 0
PDGFBP01127 AC002472.4-201ENST00000641915 272 ntBASIC15.08■□□□□ 0
PDGFBP01127 MRPL37P1-201ENST00000592451 1337 ntBASIC15.08■□□□□ 0
PDGFBP01127 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.08■□□□□ 0
PDGFBP01127 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.08■□□□□ 0
PDGFBP01127 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC15.08■□□□□ 0
PDGFBP01127 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
PDGFBP01127 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
PDGFBP01127 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.08■□□□□ 0
PDGFBP01127 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PDGFBP01127 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.08■□□□□ 0
PDGFBP01127 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
PDGFBP01127 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
PDGFBP01127 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC15.08■□□□□ 0
PDGFBP01127 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
PDGFBP01127 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
PDGFBP01127 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PDGFBP01127 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.07■□□□□ 0
PDGFBP01127 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.07■□□□□ 0
PDGFBP01127 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.07■□□□□ 0
PDGFBP01127 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
PDGFBP01127 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.07■□□□□ 0
PDGFBP01127 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
PDGFBP01127 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.07■□□□□ 0
PDGFBP01127 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.07■□□□□ 0
PDGFBP01127 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PDGFBP01127 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PDGFBP01127 BCAS2P2-201ENST00000425064 674 ntBASIC15.07■□□□□ 0
PDGFBP01127 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC15.07■□□□□ 0
PDGFBP01127 AC092638.2-201ENST00000441105 947 ntBASIC15.07■□□□□ 0
PDGFBP01127 FTH1P22-201ENST00000456305 520 ntBASIC15.07■□□□□ 0
PDGFBP01127 AC006122.1-201ENST00000493323 440 ntBASIC15.07■□□□□ 0
PDGFBP01127 RN7SL81P-201ENST00000493781 261 ntBASIC15.07■□□□□ 0
PDGFBP01127 ORAOV1P1-201ENST00000503108 395 ntBASIC15.07■□□□□ 0
PDGFBP01127 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.07■□□□□ 0
PDGFBP01127 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.07■□□□□ 0
PDGFBP01127 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC15.07■□□□□ 0
PDGFBP01127 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
PDGFBP01127 AC027237.1-201ENST00000560942 655 ntBASIC15.07■□□□□ 0
PDGFBP01127 MT3-203ENST00000565838 421 ntTSL 3 BASIC15.07■□□□□ 0
PDGFBP01127 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
PDGFBP01127 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.07■□□□□ 0
PDGFBP01127 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PDGFBP01127 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PDGFBP01127 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.07■□□□□ 0
PDGFBP01127 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PDGFBP01127 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
PDGFBP01127 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PDGFBP01127 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.07■□□□□ 0
PDGFBP01127 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PDGFBP01127 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.07■□□□□ 0
PDGFBP01127 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PDGFBP01127 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
PDGFBP01127 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PDGFBP01127 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
PDGFBP01127 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.07■□□□□ 0
PDGFBP01127 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PDGFBP01127 CYP4F23P-201ENST00000593402 1579 ntBASIC15.07■□□□□ 0
PDGFBP01127 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.07■□□□□ 0
PDGFBP01127 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.07■□□□□ 0
PDGFBP01127 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.06■□□□□ 0
PDGFBP01127 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
PDGFBP01127 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDGFBP01127 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.06■□□□□ 0
PDGFBP01127 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.06■□□□□ 0
PDGFBP01127 AC144522.1-201ENST00000625111 1658 ntBASIC15.06■□□□□ 0
PDGFBP01127 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
PDGFBP01127 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDGFBP01127 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.06■□□□□ 0
PDGFBP01127 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
PDGFBP01127 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.06■□□□□ 0
PDGFBP01127 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.06■□□□□ 0
PDGFBP01127 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDGFBP01127 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDGFBP01127 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.06■□□□□ 0
PDGFBP01127 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDGFBP01127 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDGFBP01127 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms