Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC16.4■□□□□ 0.22
CSPG5O95196 CSH2-202ENST00000345366 598 ntTSL 5 BASIC16.4■□□□□ 0.22
CSPG5O95196 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CSPG5O95196 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSPG5O95196 KRTAP19-9P-201ENST00000421795 191 ntBASIC16.4■□□□□ 0.22
CSPG5O95196 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CSPG5O95196 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC16.4■□□□□ 0.22
CSPG5O95196 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC16.4■□□□□ 0.22
CSPG5O95196 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.4■□□□□ 0.22
CSPG5O95196 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.4■□□□□ 0.22
CSPG5O95196 MIR4313-201ENST00000580760 101 ntBASIC16.4■□□□□ 0.22
CSPG5O95196 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.4■□□□□ 0.22
CSPG5O95196 PPY2P-201ENST00000582808 702 ntBASIC16.4■□□□□ 0.22
CSPG5O95196 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CSPG5O95196 AC138627.1-207ENST00000641560 1006 ntBASIC16.4■□□□□ 0.22
CSPG5O95196 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.4■□□□□ 0.22
CSPG5O95196 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CSPG5O95196 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSPG5O95196 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSPG5O95196 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSPG5O95196 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.4■□□□□ 0.22
CSPG5O95196 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CSPG5O95196 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CSPG5O95196 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CSPG5O95196 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSPG5O95196 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSPG5O95196 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CSPG5O95196 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CSPG5O95196 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CSPG5O95196 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSPG5O95196 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSPG5O95196 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.39■□□□□ 0.22
CSPG5O95196 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.39■□□□□ 0.22
CSPG5O95196 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
CSPG5O95196 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CSPG5O95196 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CSPG5O95196 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.39■□□□□ 0.21
CSPG5O95196 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSPG5O95196 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CSPG5O95196 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSPG5O95196 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.39■□□□□ 0.21
CSPG5O95196 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSPG5O95196 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CSPG5O95196 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSPG5O95196 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CSPG5O95196 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CSPG5O95196 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.39■□□□□ 0.21
CSPG5O95196 ACTBP8-201ENST00000403258 1108 ntBASIC16.39■□□□□ 0.21
CSPG5O95196 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.39■□□□□ 0.21
CSPG5O95196 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.39■□□□□ 0.21
CSPG5O95196 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.39■□□□□ 0.21
CSPG5O95196 GAPDHP40-201ENST00000505218 1006 ntBASIC16.39■□□□□ 0.21
CSPG5O95196 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.39■□□□□ 0.21
CSPG5O95196 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CSPG5O95196 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC16.39■□□□□ 0.21
CSPG5O95196 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC16.39■□□□□ 0.21
CSPG5O95196 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.39■□□□□ 0.21
CSPG5O95196 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC16.39■□□□□ 0.21
CSPG5O95196 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.39■□□□□ 0.21
CSPG5O95196 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
CSPG5O95196 OR10B1P-201ENST00000601666 907 ntBASIC16.39■□□□□ 0.21
CSPG5O95196 AP001505.2-201ENST00000616815 443 ntBASIC16.39■□□□□ 0.21
CSPG5O95196 AC128714.1-201ENST00000637035 887 ntBASIC16.39■□□□□ 0.21
CSPG5O95196 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.39■□□□□ 0.21
CSPG5O95196 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSPG5O95196 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSPG5O95196 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CSPG5O95196 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSPG5O95196 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.39■□□□□ 0.21
CSPG5O95196 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSPG5O95196 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CSPG5O95196 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSPG5O95196 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSPG5O95196 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSPG5O95196 NORAD-201ENST00000565493 5339 ntBASIC16.39■□□□□ 0.21
CSPG5O95196 AC092850.2-201ENST00000623821 2697 ntBASIC16.39■□□□□ 0.21
CSPG5O95196 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CSPG5O95196 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CSPG5O95196 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CSPG5O95196 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSPG5O95196 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSPG5O95196 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSPG5O95196 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSPG5O95196 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.38■□□□□ 0.21
CSPG5O95196 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSPG5O95196 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CSPG5O95196 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSPG5O95196 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CSPG5O95196 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSPG5O95196 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.38■□□□□ 0.21
CSPG5O95196 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CSPG5O95196 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.38■□□□□ 0.21
CSPG5O95196 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CSPG5O95196 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
CSPG5O95196 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSPG5O95196 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
CSPG5O95196 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
CSPG5O95196 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC16.38■□□□□ 0.21
CSPG5O95196 PTPA-217ENST00000434095 870 ntTSL 2 BASIC16.38■□□□□ 0.21
CSPG5O95196 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms