Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM38O00635 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM38O00635 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TRIM38O00635 C18orf15-201ENST00000623680 2534 ntBASIC15.41■□□□□ 0.06
TRIM38O00635 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TRIM38O00635 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM38O00635 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM38O00635 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM38O00635 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
TRIM38O00635 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM38O00635 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TRIM38O00635 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TRIM38O00635 TOMM22P5-201ENST00000416399 439 ntBASIC15.41■□□□□ 0.06
TRIM38O00635 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM38O00635 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.41■□□□□ 0.06
TRIM38O00635 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM38O00635 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.41■□□□□ 0.06
TRIM38O00635 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM38O00635 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.41■□□□□ 0.06
TRIM38O00635 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM38O00635 AL583810.1-201ENST00000553344 1045 ntBASIC15.41■□□□□ 0.06
TRIM38O00635 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.41■□□□□ 0.06
TRIM38O00635 AC124283.3-201ENST00000570869 594 ntBASIC15.41■□□□□ 0.06
TRIM38O00635 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM38O00635 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.41■□□□□ 0.06
TRIM38O00635 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM38O00635 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.41■□□□□ 0.06
TRIM38O00635 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM38O00635 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM38O00635 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM38O00635 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM38O00635 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM38O00635 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.41■□□□□ 0.06
TRIM38O00635 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.41■□□□□ 0.06
TRIM38O00635 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM38O00635 AL161772.1-201ENST00000610494 4412 ntBASIC15.41■□□□□ 0.06
TRIM38O00635 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM38O00635 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TRIM38O00635 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM38O00635 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM38O00635 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM38O00635 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.4■□□□□ 0.06
TRIM38O00635 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM38O00635 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIM38O00635 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIM38O00635 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM38O00635 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.4■□□□□ 0.06
TRIM38O00635 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM38O00635 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRIM38O00635 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.4■□□□□ 0.06
TRIM38O00635 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
TRIM38O00635 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TRIM38O00635 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM38O00635 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TRIM38O00635 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM38O00635 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
TRIM38O00635 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM38O00635 AC013726.1-201ENST00000563747 2285 ntBASIC15.4■□□□□ 0.06
TRIM38O00635 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.4■□□□□ 0.06
TRIM38O00635 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM38O00635 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.4■□□□□ 0.06
TRIM38O00635 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM38O00635 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
TRIM38O00635 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM38O00635 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.4■□□□□ 0.06
TRIM38O00635 AC099336.1-201ENST00000417053 1171 ntBASIC15.4■□□□□ 0.06
TRIM38O00635 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.4■□□□□ 0.06
TRIM38O00635 AC134915.1-201ENST00000426461 574 ntBASIC15.4■□□□□ 0.06
TRIM38O00635 ACTBP11-201ENST00000436287 1126 ntBASIC15.4■□□□□ 0.06
TRIM38O00635 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.4■□□□□ 0.06
TRIM38O00635 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM38O00635 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TRIM38O00635 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.4■□□□□ 0.06
TRIM38O00635 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRIM38O00635 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM38O00635 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.4■□□□□ 0.06
TRIM38O00635 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TRIM38O00635 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIM38O00635 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.4■□□□□ 0.06
TRIM38O00635 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.4■□□□□ 0.06
TRIM38O00635 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.4■□□□□ 0.06
TRIM38O00635 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM38O00635 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM38O00635 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIM38O00635 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIM38O00635 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM38O00635 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRIM38O00635 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM38O00635 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM38O00635 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM38O00635 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM38O00635 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.4■□□□□ 0.06
TRIM38O00635 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM38O00635 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM38O00635 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM38O00635 GRK6P1-201ENST00000400595 1711 ntBASIC15.4■□□□□ 0.06
TRIM38O00635 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.4■□□□□ 0.06
TRIM38O00635 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM38O00635 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM38O00635 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms