Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 AC018846.1-201ENST00000568231 183 ntBASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM88BA6NKF7 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
TMEM88BA6NKF7 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM88BA6NKF7 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEM88BA6NKF7 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM88BA6NKF7 AL137783.1-201ENST00000623494 1896 ntBASIC17.31■□□□□ 0.36
TMEM88BA6NKF7 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM88BA6NKF7 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM88BA6NKF7 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM88BA6NKF7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM88BA6NKF7 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC17.31■□□□□ 0.36
TMEM88BA6NKF7 AF274858.1-201ENST00000406288 372 ntBASIC17.31■□□□□ 0.36
TMEM88BA6NKF7 GNG10P1-201ENST00000452289 199 ntBASIC17.31■□□□□ 0.36
TMEM88BA6NKF7 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEM88BA6NKF7 RN7SL582P-201ENST00000491078 279 ntBASIC17.31■□□□□ 0.36
TMEM88BA6NKF7 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC17.31■□□□□ 0.36
TMEM88BA6NKF7 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC17.31■□□□□ 0.36
TMEM88BA6NKF7 TREHP1-201ENST00000531328 465 ntBASIC17.31■□□□□ 0.36
TMEM88BA6NKF7 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC17.31■□□□□ 0.36
TMEM88BA6NKF7 GOLGA2P7-209ENST00000560408 745 ntBASIC17.31■□□□□ 0.36
TMEM88BA6NKF7 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC17.31■□□□□ 0.36
TMEM88BA6NKF7 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEM88BA6NKF7 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC17.31■□□□□ 0.36
TMEM88BA6NKF7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM88BA6NKF7 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
TMEM88BA6NKF7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM88BA6NKF7 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEM88BA6NKF7 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM88BA6NKF7 PHB-210ENST00000511832 1509 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEM88BA6NKF7 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.31■□□□□ 0.36
TMEM88BA6NKF7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEM88BA6NKF7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
TMEM88BA6NKF7 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 KRT17P5-201ENST00000332088 839 ntBASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 KRT18P36-201ENST00000411618 1276 ntBASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 RN7SL530P-201ENST00000485097 298 ntBASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.3■□□□□ 0.36
TMEM88BA6NKF7 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms