Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 AC023794.5-201ENST00000564380 2157 ntBASIC14.29□□□□□ -0.12
TCRBV3S1A0A5B6 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
TCRBV3S1A0A5B6 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV3S1A0A5B6 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV3S1A0A5B6 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV3S1A0A5B6 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV3S1A0A5B6 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TCRBV3S1A0A5B6 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.28□□□□□ -0.12
TCRBV3S1A0A5B6 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV3S1A0A5B6 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
TCRBV3S1A0A5B6 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.28□□□□□ -0.12
TCRBV3S1A0A5B6 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV3S1A0A5B6 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
TCRBV3S1A0A5B6 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV3S1A0A5B6 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.28□□□□□ -0.12
TCRBV3S1A0A5B6 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.28□□□□□ -0.12
TCRBV3S1A0A5B6 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV3S1A0A5B6 SPCS2P4-201ENST00000436160 681 ntBASIC14.28□□□□□ -0.12
TCRBV3S1A0A5B6 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.28□□□□□ -0.12
TCRBV3S1A0A5B6 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.28□□□□□ -0.12
TCRBV3S1A0A5B6 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.28□□□□□ -0.12
TCRBV3S1A0A5B6 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.28□□□□□ -0.12
TCRBV3S1A0A5B6 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.28□□□□□ -0.12
TCRBV3S1A0A5B6 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.28□□□□□ -0.12
TCRBV3S1A0A5B6 FAM86C2P-203ENST00000528684 1004 ntBASIC14.28□□□□□ -0.12
TCRBV3S1A0A5B6 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.28□□□□□ -0.12
TCRBV3S1A0A5B6 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV3S1A0A5B6 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.28□□□□□ -0.12
TCRBV3S1A0A5B6 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TCRBV3S1A0A5B6 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
TCRBV3S1A0A5B6 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV3S1A0A5B6 AC020910.6-201ENST00000623084 1459 ntBASIC14.28□□□□□ -0.12
TCRBV3S1A0A5B6 AC015909.5-201ENST00000624336 2266 ntBASIC14.28□□□□□ -0.12
TCRBV3S1A0A5B6 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.28□□□□□ -0.12
TCRBV3S1A0A5B6 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV3S1A0A5B6 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV3S1A0A5B6 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.28□□□□□ -0.12
TCRBV3S1A0A5B6 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV3S1A0A5B6 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.28□□□□□ -0.12
TCRBV3S1A0A5B6 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
TCRBV3S1A0A5B6 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.28□□□□□ -0.12
TCRBV3S1A0A5B6 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TCRBV3S1A0A5B6 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TCRBV3S1A0A5B6 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.27□□□□□ -0.12
TCRBV3S1A0A5B6 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TCRBV3S1A0A5B6 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
TCRBV3S1A0A5B6 AC012617.1-204ENST00000586340 2305 ntBASIC14.27□□□□□ -0.12
TCRBV3S1A0A5B6 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TCRBV3S1A0A5B6 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TCRBV3S1A0A5B6 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TCRBV3S1A0A5B6 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TCRBV3S1A0A5B6 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.27□□□□□ -0.12
TCRBV3S1A0A5B6 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TCRBV3S1A0A5B6 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
TCRBV3S1A0A5B6 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TCRBV3S1A0A5B6 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
TCRBV3S1A0A5B6 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.27□□□□□ -0.12
TCRBV3S1A0A5B6 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
TCRBV3S1A0A5B6 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TCRBV3S1A0A5B6 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TCRBV3S1A0A5B6 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.27□□□□□ -0.12
TCRBV3S1A0A5B6 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
TCRBV3S1A0A5B6 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.27□□□□□ -0.12
TCRBV3S1A0A5B6 AL360270.3-201ENST00000609118 1348 ntBASIC14.27□□□□□ -0.12
TCRBV3S1A0A5B6 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TCRBV3S1A0A5B6 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TCRBV3S1A0A5B6 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TCRBV3S1A0A5B6 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
TCRBV3S1A0A5B6 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TCRBV3S1A0A5B6 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.27□□□□□ -0.13
TCRBV3S1A0A5B6 ADH5P3-201ENST00000433842 1137 ntBASIC14.27□□□□□ -0.13
TCRBV3S1A0A5B6 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.27□□□□□ -0.13
TCRBV3S1A0A5B6 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.27□□□□□ -0.13
TCRBV3S1A0A5B6 RNA5SP419-201ENST00000515908 135 ntBASIC14.27□□□□□ -0.13
TCRBV3S1A0A5B6 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.27□□□□□ -0.13
TCRBV3S1A0A5B6 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.27□□□□□ -0.13
TCRBV3S1A0A5B6 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.27□□□□□ -0.13
TCRBV3S1A0A5B6 KRT8P23-201ENST00000560090 1207 ntBASIC14.27□□□□□ -0.13
TCRBV3S1A0A5B6 RARRES2P9-201ENST00000565168 469 ntBASIC14.27□□□□□ -0.13
TCRBV3S1A0A5B6 AC106730.1-201ENST00000566722 1090 ntBASIC14.27□□□□□ -0.13
TCRBV3S1A0A5B6 AL513190.1-201ENST00000621254 727 ntBASIC14.27□□□□□ -0.13
TCRBV3S1A0A5B6 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.27□□□□□ -0.13
TCRBV3S1A0A5B6 AC084121.4-201ENST00000641598 221 ntBASIC14.27□□□□□ -0.13
TCRBV3S1A0A5B6 AF228730.8-201ENST00000642140 221 ntBASIC14.27□□□□□ -0.13
TCRBV3S1A0A5B6 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TCRBV3S1A0A5B6 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TCRBV3S1A0A5B6 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TCRBV3S1A0A5B6 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
TCRBV3S1A0A5B6 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TCRBV3S1A0A5B6 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
TCRBV3S1A0A5B6 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.27□□□□□ -0.13
TCRBV3S1A0A5B6 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
TCRBV3S1A0A5B6 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TCRBV3S1A0A5B6 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TCRBV3S1A0A5B6 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms