Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
A0A1W2PRF3 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
A0A1W2PRF3 AC105250.1-201ENST00000509378 2057 ntBASIC12.61□□□□□ -0.39
A0A1W2PRF3 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.61□□□□□ -0.39
A0A1W2PRF3 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC12.61□□□□□ -0.39
A0A1W2PRF3 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
A0A1W2PRF3 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
A0A1W2PRF3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
A0A1W2PRF3 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.61□□□□□ -0.39
A0A1W2PRF3 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
A0A1W2PRF3 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.61□□□□□ -0.39
A0A1W2PRF3 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
A0A1W2PRF3 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
A0A1W2PRF3 AC084364.1-201ENST00000551967 1556 ntBASIC12.61□□□□□ -0.39
A0A1W2PRF3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
A0A1W2PRF3 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
A0A1W2PRF3 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
A0A1W2PRF3 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
A0A1W2PRF3 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.61□□□□□ -0.39
A0A1W2PRF3 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
A0A1W2PRF3 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
A0A1W2PRF3 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
A0A1W2PRF3 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
A0A1W2PRF3 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
A0A1W2PRF3 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
A0A1W2PRF3 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.61□□□□□ -0.39
A0A1W2PRF3 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.61□□□□□ -0.39
A0A1W2PRF3 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12.61□□□□□ -0.39
A0A1W2PRF3 U91328.1-201ENST00000437528 223 ntBASIC12.61□□□□□ -0.39
A0A1W2PRF3 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC12.61□□□□□ -0.39
A0A1W2PRF3 CROCCP4-201ENST00000457096 498 ntBASIC12.61□□□□□ -0.39
A0A1W2PRF3 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
A0A1W2PRF3 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
A0A1W2PRF3 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
A0A1W2PRF3 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
A0A1W2PRF3 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.61□□□□□ -0.39
A0A1W2PRF3 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC12.61□□□□□ -0.39
A0A1W2PRF3 AC008735.3-201ENST00000596646 500 ntBASIC12.61□□□□□ -0.39
A0A1W2PRF3 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.61□□□□□ -0.39
A0A1W2PRF3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
A0A1W2PRF3 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
A0A1W2PRF3 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
A0A1W2PRF3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
A0A1W2PRF3 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
A0A1W2PRF3 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
A0A1W2PRF3 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
A0A1W2PRF3 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
A0A1W2PRF3 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
A0A1W2PRF3 TCAF2P1-201ENST00000291129 2421 ntBASIC12.61□□□□□ -0.39
A0A1W2PRF3 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
A0A1W2PRF3 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
A0A1W2PRF3 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
A0A1W2PRF3 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.61□□□□□ -0.39
A0A1W2PRF3 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
A0A1W2PRF3 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.61□□□□□ -0.39
A0A1W2PRF3 AC087481.3-201ENST00000602886 1894 ntBASIC12.61□□□□□ -0.39
A0A1W2PRF3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
A0A1W2PRF3 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
A0A1W2PRF3 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
A0A1W2PRF3 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
A0A1W2PRF3 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
A0A1W2PRF3 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC12.61□□□□□ -0.39
A0A1W2PRF3 CICP11-201ENST00000434745 2827 ntBASIC12.61□□□□□ -0.39
A0A1W2PRF3 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
A0A1W2PRF3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
A0A1W2PRF3 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC12.61□□□□□ -0.39
A0A1W2PRF3 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
A0A1W2PRF3 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
A0A1W2PRF3 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
A0A1W2PRF3 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
A0A1W2PRF3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
A0A1W2PRF3 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
A0A1W2PRF3 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
A0A1W2PRF3 AC090616.6-203ENST00000579186 1945 ntBASIC12.6□□□□□ -0.39
A0A1W2PRF3 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
A0A1W2PRF3 PGR-210ENST00000619228 3038 ntTSL 5 BASIC12.6□□□□□ -0.39
A0A1W2PRF3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
A0A1W2PRF3 MSTO2P-201ENST00000314835 1709 ntBASIC12.6□□□□□ -0.39
A0A1W2PRF3 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
A0A1W2PRF3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
A0A1W2PRF3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
A0A1W2PRF3 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
A0A1W2PRF3 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
A0A1W2PRF3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
A0A1W2PRF3 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
A0A1W2PRF3 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
A0A1W2PRF3 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
A0A1W2PRF3 AC112492.5-201ENST00000421897 457 ntBASIC12.6□□□□□ -0.39
A0A1W2PRF3 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC12.6□□□□□ -0.39
A0A1W2PRF3 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
A0A1W2PRF3 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC12.6□□□□□ -0.39
A0A1W2PRF3 BCRP2-202ENST00000447763 634 ntBASIC12.6□□□□□ -0.39
A0A1W2PRF3 GPR53P-205ENST00000457298 1084 ntBASIC12.6□□□□□ -0.39
A0A1W2PRF3 BCRP6-201ENST00000510112 632 ntBASIC12.6□□□□□ -0.39
A0A1W2PRF3 BCRP7-201ENST00000511549 544 ntBASIC12.6□□□□□ -0.39
A0A1W2PRF3 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC12.6□□□□□ -0.39
A0A1W2PRF3 KRT17P8-201ENST00000540749 863 ntBASIC12.6□□□□□ -0.39
A0A1W2PRF3 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC12.6□□□□□ -0.39
A0A1W2PRF3 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
A0A1W2PRF3 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms