Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC19.08■□□□□ 0.64
LOC102724428A0A0B4J2F2 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC19.08■□□□□ 0.64
LOC102724428A0A0B4J2F2 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC19.08■□□□□ 0.64
LOC102724428A0A0B4J2F2 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC19.08■□□□□ 0.64
LOC102724428A0A0B4J2F2 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC19.08■□□□□ 0.64
LOC102724428A0A0B4J2F2 AC007881.3-201ENST00000608897 607 ntBASIC19.08■□□□□ 0.64
LOC102724428A0A0B4J2F2 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LOC102724428A0A0B4J2F2 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
LOC102724428A0A0B4J2F2 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LOC102724428A0A0B4J2F2 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LOC102724428A0A0B4J2F2 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
LOC102724428A0A0B4J2F2 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC19.08■□□□□ 0.64
LOC102724428A0A0B4J2F2 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LOC102724428A0A0B4J2F2 CYP51A1P3-201ENST00000400072 1428 ntBASIC19.08■□□□□ 0.64
LOC102724428A0A0B4J2F2 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LOC102724428A0A0B4J2F2 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
LOC102724428A0A0B4J2F2 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.07■□□□□ 0.64
LOC102724428A0A0B4J2F2 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
LOC102724428A0A0B4J2F2 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC19.07■□□□□ 0.64
LOC102724428A0A0B4J2F2 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.07■□□□□ 0.64
LOC102724428A0A0B4J2F2 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LOC102724428A0A0B4J2F2 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
LOC102724428A0A0B4J2F2 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.07■□□□□ 0.64
LOC102724428A0A0B4J2F2 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
LOC102724428A0A0B4J2F2 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LOC102724428A0A0B4J2F2 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LOC102724428A0A0B4J2F2 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LOC102724428A0A0B4J2F2 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LOC102724428A0A0B4J2F2 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LOC102724428A0A0B4J2F2 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LOC102724428A0A0B4J2F2 AL512430.1-201ENST00000392575 860 ntBASIC19.07■□□□□ 0.64
LOC102724428A0A0B4J2F2 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC19.07■□□□□ 0.64
LOC102724428A0A0B4J2F2 TLE1P1-201ENST00000422965 589 ntBASIC19.07■□□□□ 0.64
LOC102724428A0A0B4J2F2 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC19.07■□□□□ 0.64
LOC102724428A0A0B4J2F2 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC19.07■□□□□ 0.64
LOC102724428A0A0B4J2F2 NAGK-204ENST00000443872 878 ntTSL 3 BASIC19.07■□□□□ 0.64
LOC102724428A0A0B4J2F2 KRT18P66-201ENST00000452970 1269 ntBASIC19.07■□□□□ 0.64
LOC102724428A0A0B4J2F2 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC19.07■□□□□ 0.64
LOC102724428A0A0B4J2F2 AC130709.1-201ENST00000484779 1212 ntBASIC19.07■□□□□ 0.64
LOC102724428A0A0B4J2F2 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC19.07■□□□□ 0.64
LOC102724428A0A0B4J2F2 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC19.07■□□□□ 0.64
LOC102724428A0A0B4J2F2 PHBP15-201ENST00000574228 665 ntBASIC19.07■□□□□ 0.64
LOC102724428A0A0B4J2F2 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC19.07■□□□□ 0.64
LOC102724428A0A0B4J2F2 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
LOC102724428A0A0B4J2F2 MIR4649-201ENST00000582839 64 ntBASIC19.07■□□□□ 0.64
LOC102724428A0A0B4J2F2 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC19.07■□□□□ 0.64
LOC102724428A0A0B4J2F2 AC005632.3-201ENST00000605544 308 ntBASIC19.07■□□□□ 0.64
LOC102724428A0A0B4J2F2 BX088702.1-201ENST00000610784 235 ntBASIC19.07■□□□□ 0.64
LOC102724428A0A0B4J2F2 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC19.07■□□□□ 0.64
LOC102724428A0A0B4J2F2 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LOC102724428A0A0B4J2F2 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC19.07■□□□□ 0.64
LOC102724428A0A0B4J2F2 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC19.07■□□□□ 0.64
LOC102724428A0A0B4J2F2 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LOC102724428A0A0B4J2F2 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LOC102724428A0A0B4J2F2 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
LOC102724428A0A0B4J2F2 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC19.07■□□□□ 0.64
LOC102724428A0A0B4J2F2 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC19.07■□□□□ 0.64
LOC102724428A0A0B4J2F2 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
LOC102724428A0A0B4J2F2 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LOC102724428A0A0B4J2F2 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
LOC102724428A0A0B4J2F2 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LOC102724428A0A0B4J2F2 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
LOC102724428A0A0B4J2F2 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LOC102724428A0A0B4J2F2 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC19.06■□□□□ 0.64
LOC102724428A0A0B4J2F2 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LOC102724428A0A0B4J2F2 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LOC102724428A0A0B4J2F2 PRAL-201ENST00000624952 3286 ntBASIC19.06■□□□□ 0.64
LOC102724428A0A0B4J2F2 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
LOC102724428A0A0B4J2F2 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC19.06■□□□□ 0.64
LOC102724428A0A0B4J2F2 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC19.06■□□□□ 0.64
LOC102724428A0A0B4J2F2 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LOC102724428A0A0B4J2F2 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC19.06■□□□□ 0.64
LOC102724428A0A0B4J2F2 TPM1-223ENST00000560445 485 ntTSL 3 BASIC19.06■□□□□ 0.64
LOC102724428A0A0B4J2F2 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC19.06■□□□□ 0.64
LOC102724428A0A0B4J2F2 LINC01783-202ENST00000614408 828 ntBASIC19.06■□□□□ 0.64
LOC102724428A0A0B4J2F2 BX284668.2-205ENST00000619677 828 ntBASIC19.06■□□□□ 0.64
LOC102724428A0A0B4J2F2 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LOC102724428A0A0B4J2F2 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LOC102724428A0A0B4J2F2 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LOC102724428A0A0B4J2F2 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LOC102724428A0A0B4J2F2 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
LOC102724428A0A0B4J2F2 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LOC102724428A0A0B4J2F2 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC19.06■□□□□ 0.64
LOC102724428A0A0B4J2F2 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LOC102724428A0A0B4J2F2 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LOC102724428A0A0B4J2F2 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC19.06■□□□□ 0.64
LOC102724428A0A0B4J2F2 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC19.05■□□□□ 0.64
LOC102724428A0A0B4J2F2 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC19.05■□□□□ 0.64
LOC102724428A0A0B4J2F2 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC19.05■□□□□ 0.64
LOC102724428A0A0B4J2F2 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LOC102724428A0A0B4J2F2 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LOC102724428A0A0B4J2F2 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.05■□□□□ 0.64
LOC102724428A0A0B4J2F2 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
LOC102724428A0A0B4J2F2 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
LOC102724428A0A0B4J2F2 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LOC102724428A0A0B4J2F2 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
LOC102724428A0A0B4J2F2 LINC01165-201ENST00000445190 1623 ntBASIC19.05■□□□□ 0.64
LOC102724428A0A0B4J2F2 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LOC102724428A0A0B4J2F2 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LOC102724428A0A0B4J2F2 NME2-201ENST00000393183 568 ntTSL 2 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms