Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 HLA-A-201ENST00000376802 1334 ntBASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRCH1Q9Y2L9 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRCH1Q9Y2L9 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.6□□□□□ -0.07
LRCH1Q9Y2L9 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRCH1Q9Y2L9 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRCH1Q9Y2L9 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRCH1Q9Y2L9 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRCH1Q9Y2L9 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRCH1Q9Y2L9 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRCH1Q9Y2L9 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LRCH1Q9Y2L9 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRCH1Q9Y2L9 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
LRCH1Q9Y2L9 AC093724.1-201ENST00000448659 1027 ntBASIC14.6□□□□□ -0.07
LRCH1Q9Y2L9 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
LRCH1Q9Y2L9 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.6□□□□□ -0.07
LRCH1Q9Y2L9 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRCH1Q9Y2L9 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.6□□□□□ -0.07
LRCH1Q9Y2L9 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.6□□□□□ -0.07
LRCH1Q9Y2L9 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.6□□□□□ -0.07
LRCH1Q9Y2L9 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.6□□□□□ -0.07
LRCH1Q9Y2L9 MIR4321-201ENST00000592276 80 ntBASIC14.6□□□□□ -0.07
LRCH1Q9Y2L9 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.6□□□□□ -0.07
LRCH1Q9Y2L9 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.6□□□□□ -0.07
LRCH1Q9Y2L9 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
LRCH1Q9Y2L9 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRCH1Q9Y2L9 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.6□□□□□ -0.07
LRCH1Q9Y2L9 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRCH1Q9Y2L9 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
LRCH1Q9Y2L9 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRCH1Q9Y2L9 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.6□□□□□ -0.07
LRCH1Q9Y2L9 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
LRCH1Q9Y2L9 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRCH1Q9Y2L9 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LRCH1Q9Y2L9 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRCH1Q9Y2L9 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.6□□□□□ -0.07
LRCH1Q9Y2L9 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRCH1Q9Y2L9 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRCH1Q9Y2L9 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.6□□□□□ -0.07
LRCH1Q9Y2L9 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LRCH1Q9Y2L9 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 AC073869.1-201ENST00000415574 2762 ntBASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 AC138969.3-201ENST00000546612 1459 ntBASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 AC138932.2-201ENST00000548268 1459 ntBASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 AC126755.4-201ENST00000549796 1459 ntBASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 RPL5P21-201ENST00000404620 815 ntBASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 AC021087.4-201ENST00000563761 564 ntBASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 AL022326.1-202ENST00000641533 845 ntBASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 OS9-218ENST00000551035 2246 ntTSL 2 BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRCH1Q9Y2L9 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms