Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.48■□□□□ 0.23
SSX2IPQ9Y2D8 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 AC126177.1-201ENST00000547829 2218 ntBASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 RNA5SP486-201ENST00000515961 83 ntBASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 AC009542.2-202ENST00000619004 1067 ntBASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 MYO15B-237ENST00000642007 4893 ntBASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SSX2IPQ9Y2D8 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.46■□□□□ 0.23
SSX2IPQ9Y2D8 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.46■□□□□ 0.23
SSX2IPQ9Y2D8 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSX2IPQ9Y2D8 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
SSX2IPQ9Y2D8 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SSX2IPQ9Y2D8 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSX2IPQ9Y2D8 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SSX2IPQ9Y2D8 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SSX2IPQ9Y2D8 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SSX2IPQ9Y2D8 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSX2IPQ9Y2D8 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SSX2IPQ9Y2D8 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
SSX2IPQ9Y2D8 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSX2IPQ9Y2D8 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
SSX2IPQ9Y2D8 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.46■□□□□ 0.23
SSX2IPQ9Y2D8 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.46■□□□□ 0.23
SSX2IPQ9Y2D8 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSX2IPQ9Y2D8 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SSX2IPQ9Y2D8 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.46■□□□□ 0.23
SSX2IPQ9Y2D8 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSX2IPQ9Y2D8 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
SSX2IPQ9Y2D8 ACTBP8-201ENST00000403258 1108 ntBASIC16.46■□□□□ 0.23
SSX2IPQ9Y2D8 FAM197Y7-201ENST00000432892 766 ntBASIC16.46■□□□□ 0.23
SSX2IPQ9Y2D8 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.46■□□□□ 0.23
SSX2IPQ9Y2D8 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.46■□□□□ 0.23
SSX2IPQ9Y2D8 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSX2IPQ9Y2D8 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSX2IPQ9Y2D8 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SSX2IPQ9Y2D8 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
SSX2IPQ9Y2D8 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.46■□□□□ 0.23
SSX2IPQ9Y2D8 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.46■□□□□ 0.23
SSX2IPQ9Y2D8 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSX2IPQ9Y2D8 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSX2IPQ9Y2D8 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSX2IPQ9Y2D8 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSX2IPQ9Y2D8 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSX2IPQ9Y2D8 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SSX2IPQ9Y2D8 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
SSX2IPQ9Y2D8 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.46■□□□□ 0.22
SSX2IPQ9Y2D8 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.46■□□□□ 0.22
SSX2IPQ9Y2D8 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SSX2IPQ9Y2D8 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
SSX2IPQ9Y2D8 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
SSX2IPQ9Y2D8 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SSX2IPQ9Y2D8 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms