Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.3■□□□□ 0.04
NCKAP1Q9Y2A7 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.3■□□□□ 0.04
NCKAP1Q9Y2A7 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
NCKAP1Q9Y2A7 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1Q9Y2A7 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
NCKAP1Q9Y2A7 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1Q9Y2A7 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1Q9Y2A7 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1Q9Y2A7 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.3■□□□□ 0.04
NCKAP1Q9Y2A7 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1Q9Y2A7 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1Q9Y2A7 MIR1247-201ENST00000408206 136 ntBASIC15.3■□□□□ 0.04
NCKAP1Q9Y2A7 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.3■□□□□ 0.04
NCKAP1Q9Y2A7 AL513523.2-202ENST00000427283 2040 ntBASIC15.3■□□□□ 0.04
NCKAP1Q9Y2A7 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.3■□□□□ 0.04
NCKAP1Q9Y2A7 AC006033.1-201ENST00000440505 426 ntBASIC15.3■□□□□ 0.04
NCKAP1Q9Y2A7 AC245100.3-201ENST00000441281 285 ntBASIC15.3■□□□□ 0.04
NCKAP1Q9Y2A7 AC104306.2-201ENST00000451877 341 ntBASIC15.3■□□□□ 0.04
NCKAP1Q9Y2A7 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1Q9Y2A7 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1Q9Y2A7 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1Q9Y2A7 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1Q9Y2A7 AP001258.2-201ENST00000529891 490 ntBASIC15.3■□□□□ 0.04
NCKAP1Q9Y2A7 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1Q9Y2A7 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
NCKAP1Q9Y2A7 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1Q9Y2A7 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.3■□□□□ 0.04
NCKAP1Q9Y2A7 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1Q9Y2A7 AC015818.8-201ENST00000587907 1519 ntBASIC15.3■□□□□ 0.04
NCKAP1Q9Y2A7 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.3■□□□□ 0.04
NCKAP1Q9Y2A7 AC007950.2-201ENST00000615045 2347 ntBASIC15.3■□□□□ 0.04
NCKAP1Q9Y2A7 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
NCKAP1Q9Y2A7 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1Q9Y2A7 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1Q9Y2A7 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.3■□□□□ 0.04
NCKAP1Q9Y2A7 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCKAP1Q9Y2A7 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.3■□□□□ 0.04
NCKAP1Q9Y2A7 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.3■□□□□ 0.04
NCKAP1Q9Y2A7 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 GPAA1P2-201ENST00000417923 928 ntBASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 KRT8P13-201ENST00000463294 1010 ntBASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NCKAP1Q9Y2A7 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.28■□□□□ 0.04
NCKAP1Q9Y2A7 PRAL-201ENST00000624952 3286 ntBASIC15.28■□□□□ 0.04
NCKAP1Q9Y2A7 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NCKAP1Q9Y2A7 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NCKAP1Q9Y2A7 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NCKAP1Q9Y2A7 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NCKAP1Q9Y2A7 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NCKAP1Q9Y2A7 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.28■□□□□ 0.04
NCKAP1Q9Y2A7 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NCKAP1Q9Y2A7 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
NCKAP1Q9Y2A7 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NCKAP1Q9Y2A7 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
NCKAP1Q9Y2A7 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NCKAP1Q9Y2A7 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.28■□□□□ 0.04
NCKAP1Q9Y2A7 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.28■□□□□ 0.04
NCKAP1Q9Y2A7 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NCKAP1Q9Y2A7 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
NCKAP1Q9Y2A7 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NCKAP1Q9Y2A7 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms