Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 AC005229.1-201ENST00000392885 409 ntBASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 AC026434.2-201ENST00000506094 1078 ntBASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 AC233724.13-201ENST00000598383 410 ntBASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 AP002414.2-201ENST00000591780 3365 ntBASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHA4Q9UN74 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHA4Q9UN74 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHA4Q9UN74 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHA4Q9UN74 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDHA4Q9UN74 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
PCDHA4Q9UN74 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDHA4Q9UN74 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDHA4Q9UN74 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHA4Q9UN74 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHA4Q9UN74 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
PCDHA4Q9UN74 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHA4Q9UN74 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHA4Q9UN74 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.38■□□□□ 0.37
PCDHA4Q9UN74 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.38■□□□□ 0.37
PCDHA4Q9UN74 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.38■□□□□ 0.37
PCDHA4Q9UN74 AL355864.2-201ENST00000447420 863 ntBASIC17.38■□□□□ 0.37
PCDHA4Q9UN74 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHA4Q9UN74 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
PCDHA4Q9UN74 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.38■□□□□ 0.37
PCDHA4Q9UN74 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PCDHA4Q9UN74 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.38■□□□□ 0.37
PCDHA4Q9UN74 BTNL10-201ENST00000595971 695 ntBASIC17.38■□□□□ 0.37
PCDHA4Q9UN74 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.38■□□□□ 0.37
PCDHA4Q9UN74 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDHA4Q9UN74 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PCDHA4Q9UN74 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHA4Q9UN74 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHA4Q9UN74 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHA4Q9UN74 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PCDHA4Q9UN74 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHA4Q9UN74 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHA4Q9UN74 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDHA4Q9UN74 AL596257.1-201ENST00000641463 2694 ntBASIC17.38■□□□□ 0.37
PCDHA4Q9UN74 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHA4Q9UN74 AL138709.1-201ENST00000614840 1693 ntBASIC17.38■□□□□ 0.37
PCDHA4Q9UN74 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHA4Q9UN74 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
PCDHA4Q9UN74 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PCDHA4Q9UN74 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
PCDHA4Q9UN74 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHA4Q9UN74 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
PCDHA4Q9UN74 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHA4Q9UN74 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PCDHA4Q9UN74 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHA4Q9UN74 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHA4Q9UN74 AC013726.1-201ENST00000563747 2285 ntBASIC17.37■□□□□ 0.37
PCDHA4Q9UN74 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHA4Q9UN74 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHA4Q9UN74 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHA4Q9UN74 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDHA4Q9UN74 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHA4Q9UN74 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PCDHA4Q9UN74 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHA4Q9UN74 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms