Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.27■□□□□ 0.03
SPASTQ9UBP0 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.27■□□□□ 0.03
SPASTQ9UBP0 AL136379.1-201ENST00000623471 2642 ntBASIC15.27■□□□□ 0.03
SPASTQ9UBP0 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
SPASTQ9UBP0 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SPASTQ9UBP0 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SPASTQ9UBP0 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.27■□□□□ 0.03
SPASTQ9UBP0 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SPASTQ9UBP0 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.26■□□□□ 0.03
SPASTQ9UBP0 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SPASTQ9UBP0 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SPASTQ9UBP0 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SPASTQ9UBP0 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SPASTQ9UBP0 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SPASTQ9UBP0 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SPASTQ9UBP0 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SPASTQ9UBP0 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SPASTQ9UBP0 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
SPASTQ9UBP0 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
SPASTQ9UBP0 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SPASTQ9UBP0 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SPASTQ9UBP0 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SPASTQ9UBP0 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.26■□□□□ 0.03
SPASTQ9UBP0 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.26■□□□□ 0.03
SPASTQ9UBP0 FTH1P14-201ENST00000482930 551 ntBASIC15.26■□□□□ 0.03
SPASTQ9UBP0 AC022137.2-201ENST00000503482 481 ntBASIC15.26■□□□□ 0.03
SPASTQ9UBP0 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.26■□□□□ 0.03
SPASTQ9UBP0 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.26■□□□□ 0.03
SPASTQ9UBP0 AP001582.1-201ENST00000525856 295 ntBASIC15.26■□□□□ 0.03
SPASTQ9UBP0 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.26■□□□□ 0.03
SPASTQ9UBP0 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.26■□□□□ 0.03
SPASTQ9UBP0 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.26■□□□□ 0.03
SPASTQ9UBP0 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SPASTQ9UBP0 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.26■□□□□ 0.03
SPASTQ9UBP0 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.26■□□□□ 0.03
SPASTQ9UBP0 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
SPASTQ9UBP0 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.26■□□□□ 0.03
SPASTQ9UBP0 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.26■□□□□ 0.03
SPASTQ9UBP0 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SPASTQ9UBP0 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SPASTQ9UBP0 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SPASTQ9UBP0 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.26■□□□□ 0.03
SPASTQ9UBP0 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SPASTQ9UBP0 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SPASTQ9UBP0 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SPASTQ9UBP0 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SPASTQ9UBP0 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.26■□□□□ 0.03
SPASTQ9UBP0 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SPASTQ9UBP0 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.25■□□□□ 0.03
SPASTQ9UBP0 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.25■□□□□ 0.03
SPASTQ9UBP0 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SPASTQ9UBP0 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SPASTQ9UBP0 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SPASTQ9UBP0 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.25■□□□□ 0.03
SPASTQ9UBP0 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPASTQ9UBP0 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SPASTQ9UBP0 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPASTQ9UBP0 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.25■□□□□ 0.03
SPASTQ9UBP0 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPASTQ9UBP0 AC073347.1-201ENST00000421633 2643 ntBASIC15.25■□□□□ 0.03
SPASTQ9UBP0 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SPASTQ9UBP0 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPASTQ9UBP0 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.25■□□□□ 0.03
SPASTQ9UBP0 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPASTQ9UBP0 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPASTQ9UBP0 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.25■□□□□ 0.03
SPASTQ9UBP0 FAM21FP-201ENST00000426241 1131 ntBASIC15.25■□□□□ 0.03
SPASTQ9UBP0 C2orf27AP3-201ENST00000434123 579 ntBASIC15.25■□□□□ 0.03
SPASTQ9UBP0 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.25■□□□□ 0.03
SPASTQ9UBP0 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.25■□□□□ 0.03
SPASTQ9UBP0 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.25■□□□□ 0.03
SPASTQ9UBP0 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.25■□□□□ 0.03
SPASTQ9UBP0 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SPASTQ9UBP0 AP000812.2-201ENST00000538934 718 ntBASIC15.25■□□□□ 0.03
SPASTQ9UBP0 AC079316.1-201ENST00000548397 411 ntBASIC15.25■□□□□ 0.03
SPASTQ9UBP0 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.25■□□□□ 0.03
SPASTQ9UBP0 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SPASTQ9UBP0 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.25■□□□□ 0.03
SPASTQ9UBP0 AL354718.3-201ENST00000616414 581 ntBASIC15.25■□□□□ 0.03
SPASTQ9UBP0 CR382287.1-201ENST00000623954 586 ntBASIC15.25■□□□□ 0.03
SPASTQ9UBP0 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPASTQ9UBP0 REXO1L6P-201ENST00000603433 1515 ntBASIC15.25■□□□□ 0.03
SPASTQ9UBP0 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SPASTQ9UBP0 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SPASTQ9UBP0 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPASTQ9UBP0 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.25■□□□□ 0.03
SPASTQ9UBP0 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SPASTQ9UBP0 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SPASTQ9UBP0 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPASTQ9UBP0 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPASTQ9UBP0 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SPASTQ9UBP0 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPASTQ9UBP0 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SPASTQ9UBP0 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SPASTQ9UBP0 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SPASTQ9UBP0 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SPASTQ9UBP0 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SPASTQ9UBP0 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SPASTQ9UBP0 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SPASTQ9UBP0 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms