Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 AC092580.3-201ENST00000430932 139 ntBASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 HIST3H2BA-201ENST00000436555 524 ntBASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 RPL13AP25-201ENST00000484130 612 ntBASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 AC025048.3-201ENST00000590609 569 ntBASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 AC005702.4-201ENST00000618393 416 ntBASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 AJ011932.1-201ENST00000621707 465 ntBASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 PGR-210ENST00000619228 3038 ntTSL 5 BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 HAL-202ENST00000538703 2637 ntTSL 2 BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 COL6A4P2-202ENST00000504443 2753 ntBASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 AC010491.1-201ENST00000563101 2797 ntBASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 AC114501.2-201ENST00000439631 535 ntBASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 KRT18P43-201ENST00000469825 1281 ntBASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 AC027796.2-201ENST00000575326 344 ntBASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 CICP24-201ENST00000605464 2705 ntBASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
LINC00474Q9P2X8 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms