Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CALCOCO1Q9P1Z2 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CALCOCO1Q9P1Z2 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CALCOCO1Q9P1Z2 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 AC245100.5-201ENST00000452108 331 ntBASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 AL512638.1-201ENST00000457493 794 ntBASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 AC097493.3-201ENST00000509725 367 ntBASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 AC105021.1-202ENST00000570572 669 ntBASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CALCOCO1Q9P1Z2 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 MIR648-201ENST00000385046 94 ntBASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 AC005034.1-201ENST00000426657 489 ntBASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 AC007967.4-201ENST00000614700 386 ntBASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CALCOCO1Q9P1Z2 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CALCOCO1Q9P1Z2 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.8■□□□□ 0.28
CALCOCO1Q9P1Z2 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC16.8■□□□□ 0.28
CALCOCO1Q9P1Z2 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.8■□□□□ 0.28
CALCOCO1Q9P1Z2 AL691432.1-201ENST00000596308 1422 ntBASIC16.8■□□□□ 0.28
CALCOCO1Q9P1Z2 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms