Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.67□□□□□ -0.38
CALYQ9NYX4 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CALYQ9NYX4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC12.67□□□□□ -0.38
CALYQ9NYX4 AJ011932.1-201ENST00000621707 465 ntBASIC12.67□□□□□ -0.38
CALYQ9NYX4 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CALYQ9NYX4 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.67□□□□□ -0.38
CALYQ9NYX4 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CALYQ9NYX4 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CALYQ9NYX4 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
CALYQ9NYX4 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CALYQ9NYX4 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CALYQ9NYX4 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CALYQ9NYX4 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CALYQ9NYX4 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CALYQ9NYX4 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CALYQ9NYX4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CALYQ9NYX4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC12.67□□□□□ -0.38
CALYQ9NYX4 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CALYQ9NYX4 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.67□□□□□ -0.38
CALYQ9NYX4 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CALYQ9NYX4 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
CALYQ9NYX4 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.67□□□□□ -0.38
CALYQ9NYX4 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CALYQ9NYX4 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CALYQ9NYX4 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CALYQ9NYX4 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CALYQ9NYX4 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
CALYQ9NYX4 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CALYQ9NYX4 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CALYQ9NYX4 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CALYQ9NYX4 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
CALYQ9NYX4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.66□□□□□ -0.38
CALYQ9NYX4 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC12.66□□□□□ -0.38
CALYQ9NYX4 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CALYQ9NYX4 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CALYQ9NYX4 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC12.66□□□□□ -0.38
CALYQ9NYX4 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CALYQ9NYX4 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CALYQ9NYX4 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CALYQ9NYX4 CICP23-201ENST00000605013 2741 ntBASIC12.66□□□□□ -0.38
CALYQ9NYX4 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CALYQ9NYX4 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CALYQ9NYX4 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CALYQ9NYX4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CALYQ9NYX4 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC12.66□□□□□ -0.38
CALYQ9NYX4 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CALYQ9NYX4 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.66□□□□□ -0.38
CALYQ9NYX4 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CALYQ9NYX4 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CALYQ9NYX4 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CALYQ9NYX4 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC12.66□□□□□ -0.38
CALYQ9NYX4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC12.66□□□□□ -0.38
CALYQ9NYX4 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC12.66□□□□□ -0.38
CALYQ9NYX4 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.66□□□□□ -0.38
CALYQ9NYX4 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CALYQ9NYX4 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.66□□□□□ -0.38
CALYQ9NYX4 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC12.66□□□□□ -0.38
CALYQ9NYX4 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC12.66□□□□□ -0.38
CALYQ9NYX4 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC12.66□□□□□ -0.38
CALYQ9NYX4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.66□□□□□ -0.38
CALYQ9NYX4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.66□□□□□ -0.38
CALYQ9NYX4 AC099568.2-201ENST00000609194 695 ntBASIC12.66□□□□□ -0.38
CALYQ9NYX4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.66□□□□□ -0.38
CALYQ9NYX4 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CALYQ9NYX4 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CALYQ9NYX4 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CALYQ9NYX4 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CALYQ9NYX4 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CALYQ9NYX4 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CALYQ9NYX4 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CALYQ9NYX4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CALYQ9NYX4 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CALYQ9NYX4 SLC7A15P-201ENST00000424028 1363 ntBASIC12.66□□□□□ -0.38
CALYQ9NYX4 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
CALYQ9NYX4 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CALYQ9NYX4 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CALYQ9NYX4 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CALYQ9NYX4 AC099063.4-201ENST00000641099 1602 ntBASIC12.66□□□□□ -0.38
CALYQ9NYX4 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CALYQ9NYX4 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CALYQ9NYX4 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CALYQ9NYX4 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CALYQ9NYX4 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
CALYQ9NYX4 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CALYQ9NYX4 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CALYQ9NYX4 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CALYQ9NYX4 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CALYQ9NYX4 AC007787.1-201ENST00000588095 1583 ntBASIC12.65□□□□□ -0.38
CALYQ9NYX4 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC12.65□□□□□ -0.38
CALYQ9NYX4 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CALYQ9NYX4 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.65□□□□□ -0.38
CALYQ9NYX4 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CALYQ9NYX4 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CALYQ9NYX4 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CALYQ9NYX4 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CALYQ9NYX4 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CALYQ9NYX4 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
CALYQ9NYX4 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC12.65□□□□□ -0.38
CALYQ9NYX4 AL138799.1-201ENST00000448213 1675 ntBASIC12.65□□□□□ -0.38
CALYQ9NYX4 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms