Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.31■□□□□ 0.36
HOXC10Q9NYD6 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
HOXC10Q9NYD6 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.31■□□□□ 0.36
HOXC10Q9NYD6 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC17.31■□□□□ 0.36
HOXC10Q9NYD6 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC17.31■□□□□ 0.36
HOXC10Q9NYD6 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.31■□□□□ 0.36
HOXC10Q9NYD6 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
HOXC10Q9NYD6 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.31■□□□□ 0.36
HOXC10Q9NYD6 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC17.31■□□□□ 0.36
HOXC10Q9NYD6 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HOXC10Q9NYD6 AL805961.1-203ENST00000641078 1258 ntBASIC17.31■□□□□ 0.36
HOXC10Q9NYD6 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
HOXC10Q9NYD6 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.31■□□□□ 0.36
HOXC10Q9NYD6 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.31■□□□□ 0.36
HOXC10Q9NYD6 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HOXC10Q9NYD6 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HOXC10Q9NYD6 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HOXC10Q9NYD6 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.31■□□□□ 0.36
HOXC10Q9NYD6 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HOXC10Q9NYD6 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HOXC10Q9NYD6 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HOXC10Q9NYD6 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HOXC10Q9NYD6 AC020910.5-201ENST00000623668 1865 ntBASIC17.31■□□□□ 0.36
HOXC10Q9NYD6 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
HOXC10Q9NYD6 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HOXC10Q9NYD6 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HOXC10Q9NYD6 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
HOXC10Q9NYD6 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
HOXC10Q9NYD6 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC10Q9NYD6 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC10Q9NYD6 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC10Q9NYD6 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC10Q9NYD6 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC10Q9NYD6 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC10Q9NYD6 AC009093.2-202ENST00000620513 2079 ntBASIC17.3■□□□□ 0.36
HOXC10Q9NYD6 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC10Q9NYD6 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC10Q9NYD6 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HOXC10Q9NYD6 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC10Q9NYD6 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC10Q9NYD6 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
HOXC10Q9NYD6 AL138725.1-201ENST00000407347 1314 ntBASIC17.3■□□□□ 0.36
HOXC10Q9NYD6 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC10Q9NYD6 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC10Q9NYD6 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC10Q9NYD6 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HOXC10Q9NYD6 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.3■□□□□ 0.36
HOXC10Q9NYD6 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.3■□□□□ 0.36
HOXC10Q9NYD6 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC17.3■□□□□ 0.36
HOXC10Q9NYD6 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC17.3■□□□□ 0.36
HOXC10Q9NYD6 MSRA-203ENST00000441698 788 ntTSL 2 BASIC17.3■□□□□ 0.36
HOXC10Q9NYD6 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC17.3■□□□□ 0.36
HOXC10Q9NYD6 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC17.3■□□□□ 0.36
HOXC10Q9NYD6 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC17.3■□□□□ 0.36
HOXC10Q9NYD6 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.3■□□□□ 0.36
HOXC10Q9NYD6 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
HOXC10Q9NYD6 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC10Q9NYD6 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC10Q9NYD6 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC10Q9NYD6 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.3■□□□□ 0.36
HOXC10Q9NYD6 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC10Q9NYD6 AC011840.2-201ENST00000563063 1520 ntBASIC17.3■□□□□ 0.36
HOXC10Q9NYD6 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC10Q9NYD6 AL365203.3-201ENST00000609742 2057 ntBASIC17.3■□□□□ 0.36
HOXC10Q9NYD6 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.3■□□□□ 0.36
HOXC10Q9NYD6 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC10Q9NYD6 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC10Q9NYD6 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 AL359258.3-201ENST00000622910 2331 ntBASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 RN7SKP230-201ENST00000365642 335 ntBASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 HLA-DQB2-229ENST00000411527 1059 ntBASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 SUPT4H1P2-201ENST00000501248 353 ntBASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 AC024681.1-201ENST00000521917 487 ntBASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC17.29■□□□□ 0.36
HOXC10Q9NYD6 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms