Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AP001267.2-201ENST00000532619 2086 ntBASIC14.01□□□□□ -0.17
CLN6Q9NWW5 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CLN6Q9NWW5 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLN6Q9NWW5 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.01□□□□□ -0.17
CLN6Q9NWW5 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLN6Q9NWW5 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CLN6Q9NWW5 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CLN6Q9NWW5 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLN6Q9NWW5 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CLN6Q9NWW5 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CLN6Q9NWW5 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
CLN6Q9NWW5 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLN6Q9NWW5 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CLN6Q9NWW5 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.01□□□□□ -0.17
CLN6Q9NWW5 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLN6Q9NWW5 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.01□□□□□ -0.17
CLN6Q9NWW5 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLN6Q9NWW5 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLN6Q9NWW5 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLN6Q9NWW5 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CLN6Q9NWW5 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CLN6Q9NWW5 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
CLN6Q9NWW5 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CLN6Q9NWW5 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
CLN6Q9NWW5 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CLN6Q9NWW5 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14□□□□□ -0.17
CLN6Q9NWW5 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14□□□□□ -0.17
CLN6Q9NWW5 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CLN6Q9NWW5 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CLN6Q9NWW5 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLN6Q9NWW5 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLN6Q9NWW5 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14□□□□□ -0.17
CLN6Q9NWW5 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14□□□□□ -0.17
CLN6Q9NWW5 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLN6Q9NWW5 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CLN6Q9NWW5 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLN6Q9NWW5 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLN6Q9NWW5 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLN6Q9NWW5 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLN6Q9NWW5 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLN6Q9NWW5 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CLN6Q9NWW5 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14□□□□□ -0.17
CLN6Q9NWW5 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLN6Q9NWW5 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14□□□□□ -0.17
CLN6Q9NWW5 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14□□□□□ -0.17
CLN6Q9NWW5 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14□□□□□ -0.17
CLN6Q9NWW5 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14□□□□□ -0.17
CLN6Q9NWW5 RN7SL589P-201ENST00000481268 310 ntBASIC14□□□□□ -0.17
CLN6Q9NWW5 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14□□□□□ -0.17
CLN6Q9NWW5 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14□□□□□ -0.17
CLN6Q9NWW5 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14□□□□□ -0.17
CLN6Q9NWW5 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14□□□□□ -0.17
CLN6Q9NWW5 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14□□□□□ -0.17
CLN6Q9NWW5 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CLN6Q9NWW5 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14□□□□□ -0.17
CLN6Q9NWW5 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CLN6Q9NWW5 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLN6Q9NWW5 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLN6Q9NWW5 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CLN6Q9NWW5 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14□□□□□ -0.17
CLN6Q9NWW5 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14□□□□□ -0.17
CLN6Q9NWW5 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
CLN6Q9NWW5 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLN6Q9NWW5 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CLN6Q9NWW5 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLN6Q9NWW5 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLN6Q9NWW5 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLN6Q9NWW5 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
CLN6Q9NWW5 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.99□□□□□ -0.17
CLN6Q9NWW5 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CLN6Q9NWW5 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLN6Q9NWW5 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.99□□□□□ -0.17
CLN6Q9NWW5 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.99□□□□□ -0.17
CLN6Q9NWW5 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLN6Q9NWW5 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLN6Q9NWW5 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLN6Q9NWW5 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLN6Q9NWW5 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLN6Q9NWW5 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.99□□□□□ -0.17
CLN6Q9NWW5 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLN6Q9NWW5 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLN6Q9NWW5 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLN6Q9NWW5 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.99□□□□□ -0.17
CLN6Q9NWW5 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.99□□□□□ -0.17
CLN6Q9NWW5 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CLN6Q9NWW5 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.99□□□□□ -0.17
CLN6Q9NWW5 RPL13AP23-201ENST00000480739 586 ntBASIC13.99□□□□□ -0.17
CLN6Q9NWW5 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.99□□□□□ -0.17
CLN6Q9NWW5 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.99□□□□□ -0.17
CLN6Q9NWW5 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.99□□□□□ -0.17
CLN6Q9NWW5 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.99□□□□□ -0.17
CLN6Q9NWW5 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.99□□□□□ -0.17
CLN6Q9NWW5 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13.99□□□□□ -0.17
CLN6Q9NWW5 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.99□□□□□ -0.17
CLN6Q9NWW5 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.99□□□□□ -0.17
CLN6Q9NWW5 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
CLN6Q9NWW5 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLN6Q9NWW5 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CLN6Q9NWW5 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLN6Q9NWW5 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms