Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 AC079781.5-202ENST00000641784 3743 ntBASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 CYP4F24P-201ENST00000586049 1580 ntBASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 AC018442.1-201ENST00000421439 2061 ntBASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 AC015802.1-201ENST00000588104 1449 ntBASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 AC136604.1-201ENST00000418535 575 ntBASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 FAM58DP-201ENST00000428076 619 ntBASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 AC079140.1-201ENST00000508039 487 ntBASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 AP005018.1-201ENST00000525475 301 ntBASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 AL512356.2-201ENST00000546955 174 ntBASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 AC099522.2-201ENST00000607001 744 ntBASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 FOXO1B-201ENST00000504678 1527 ntBASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.61□□□□□ -0.07
CCM2LQ9NUG4 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 TREML5P-201ENST00000421694 576 ntBASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 AP001059.3-201ENST00000619053 235 ntBASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 AL161645.1-201ENST00000622716 1255 ntBASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 AL607033.1-201ENST00000623900 1599 ntBASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.6□□□□□ -0.07
CCM2LQ9NUG4 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCM2LQ9NUG4 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms