Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 NFXL1-202ENST00000381538 3728 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 SCN5A-209ENST00000451551 8343 ntTSL 5 BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 ACBD5-203ENST00000375901 3685 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 DBIL5P-203ENST00000536214 2677 ntBASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
CDC42SE1Q9NRR8 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 EYA3-202ENST00000373864 2459 ntTSL 5 BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 REPS1-205ENST00000415951 2424 ntTSL 5 BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 ANKRD34B-201ENST00000338682 3938 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 LAMB3-202ENST00000367030 3931 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 TADA2B-205ENST00000515646 3818 ntBASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 AL592424.1-201ENST00000563624 1536 ntBASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 API5-203ENST00000455725 2257 ntTSL 2 BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 GUCY1B3-202ENST00000502959 2255 ntTSL 2 BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 AL162727.1-201ENST00000437712 3043 ntTSL 2 BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 POLA2-201ENST00000265465 3744 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 TF-201ENST00000402696 2968 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 PLEKHG5-208ENST00000400915 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 SEC14L2-214ENST00000615189 4382 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 MFF-204ENST00000353339 2186 ntTSL 5 BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 RAB7B-201ENST00000617070 2888 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 BCL2L11-218ENST00000615946 5026 ntTSL 5 BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 BCL2L11-220ENST00000620862 5044 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 KRT8P11-201ENST00000409686 1436 ntBASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 MBP-207ENST00000397865 2127 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 ZIC4-217ENST00000525172 4152 ntTSL 2 BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 AC092335.1-201ENST00000509037 2066 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 MCM4-215ENST00000523944 4105 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 TECTB-201ENST00000369422 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 SLC35B4-201ENST00000378509 6797 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 LIG1-201ENST00000263274 3384 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 SACS-202ENST00000402364 15134 ntTSL 2 BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 FILIP1L-203ENST00000383694 3280 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 CDKN2B-201ENST00000276925 3911 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 NRP1-201ENST00000265371 5882 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 AL365181.2-201ENST00000606343 3222 ntBASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 LRRCC1-201ENST00000360375 3813 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 DUX4L2-201ENST00000561772 1275 ntBASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 TK2-216ENST00000564917 1156 ntTSL 3 BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 AL138724.1-201ENST00000606771 1088 ntBASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 AC092028.1-203ENST00000608262 953 ntBASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 DUX4L6-201ENST00000626483 1275 ntBASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 DUX4L1-201ENST00000627662 1275 ntBASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 DUX4L8-201ENST00000629013 1275 ntBASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 DUX4L3-201ENST00000630187 1275 ntBASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 DUX4L7-201ENST00000630678 1275 ntBASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 DUX4L5-201ENST00000630834 1275 ntBASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 CPT2-209ENST00000636935 803 ntTSL 5 BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 PFKM-202ENST00000340802 3176 ntTSL 2 BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 CDH1-212ENST00000611625 4878 ntTSL 5 BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 CD36-207ENST00000432207 1808 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 AC092802.1-201ENST00000421762 2447 ntTSL 2 BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 RNF125-201ENST00000217740 6020 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 IL17REL-201ENST00000341280 3500 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 PTGER3-206ENST00000370924 6982 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 SF1-204ENST00000377390 3470 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 SPIN3-201ENST00000374919 4642 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 ZNF555-203ENST00000591539 2270 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 AP2A1-201ENST00000354293 3388 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 AC135050.1-201ENST00000622229 3380 ntTSL 2 BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 ZNF169-204ENST00000481550 1696 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 FLNB-201ENST00000295956 9463 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 SYBU-203ENST00000408889 2776 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
CDC42SE1Q9NRR8 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms