Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
COMMD4Q9H0A8 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
COMMD4Q9H0A8 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
COMMD4Q9H0A8 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.56□□□□□ -0.24
COMMD4Q9H0A8 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.56□□□□□ -0.24
COMMD4Q9H0A8 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
COMMD4Q9H0A8 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 MIR574-201ENST00000385209 96 ntBASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 AL133267.1-201ENST00000398220 340 ntBASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 AL022342.1-201ENST00000400363 863 ntBASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 AC005237.2-201ENST00000434368 219 ntBASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 AC003101.2-201ENST00000612557 442 ntBASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 AL035456.1-201ENST00000456064 1369 ntBASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
COMMD4Q9H0A8 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 BX640514.1-201ENST00000583223 1918 ntBASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 MIR940-201ENST00000401276 94 ntBASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 KRT18P32-201ENST00000424695 1287 ntBASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 HIST3H2BA-201ENST00000436555 524 ntBASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 MTDHP5-201ENST00000598980 586 ntBASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.54□□□□□ -0.24
COMMD4Q9H0A8 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms