Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 RN7SL399P-201ENST00000471648 279 ntBASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 MIR8072-201ENST00000614241 80 ntBASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PCGF1Q9BSM1 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
PCGF1Q9BSM1 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
PCGF1Q9BSM1 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
PCGF1Q9BSM1 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 GRK6P1-201ENST00000400595 1711 ntBASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 TMBIM7P-203ENST00000641617 1718 ntBASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 AL512384.1-201ENST00000406683 331 ntBASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 AC097359.3-201ENST00000603982 1210 ntBASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 MYO15B-237ENST00000642007 4893 ntBASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
PCGF1Q9BSM1 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.88□□□□□ -0.35
PCGF1Q9BSM1 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms