Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
EYA3Q99504 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EYA3Q99504 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EYA3Q99504 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
EYA3Q99504 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
EYA3Q99504 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
EYA3Q99504 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EYA3Q99504 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
EYA3Q99504 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
EYA3Q99504 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
EYA3Q99504 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EYA3Q99504 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
EYA3Q99504 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EYA3Q99504 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.36■□□□□ 0.53
EYA3Q99504 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
EYA3Q99504 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
EYA3Q99504 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EYA3Q99504 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
EYA3Q99504 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
EYA3Q99504 AL353637.1-201ENST00000451571 732 ntBASIC18.36■□□□□ 0.53
EYA3Q99504 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC18.36■□□□□ 0.53
EYA3Q99504 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC18.36■□□□□ 0.53
EYA3Q99504 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC18.36■□□□□ 0.53
EYA3Q99504 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
EYA3Q99504 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
EYA3Q99504 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
EYA3Q99504 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
EYA3Q99504 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
EYA3Q99504 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EYA3Q99504 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC18.36■□□□□ 0.53
EYA3Q99504 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EYA3Q99504 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
EYA3Q99504 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
EYA3Q99504 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
EYA3Q99504 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC18.35■□□□□ 0.53
EYA3Q99504 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
EYA3Q99504 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EYA3Q99504 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
EYA3Q99504 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EYA3Q99504 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EYA3Q99504 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EYA3Q99504 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EYA3Q99504 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
EYA3Q99504 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC18.35■□□□□ 0.53
EYA3Q99504 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC18.35■□□□□ 0.53
EYA3Q99504 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
EYA3Q99504 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC18.35■□□□□ 0.53
EYA3Q99504 RPL18P13-201ENST00000478088 569 ntBASIC18.35■□□□□ 0.53
EYA3Q99504 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC18.35■□□□□ 0.53
EYA3Q99504 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC18.35■□□□□ 0.53
EYA3Q99504 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
EYA3Q99504 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC18.35■□□□□ 0.53
EYA3Q99504 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC18.35■□□□□ 0.53
EYA3Q99504 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC18.35■□□□□ 0.53
EYA3Q99504 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
EYA3Q99504 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC18.35■□□□□ 0.53
EYA3Q99504 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
EYA3Q99504 AL353770.1-201ENST00000614915 403 ntBASIC18.35■□□□□ 0.53
EYA3Q99504 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
EYA3Q99504 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
EYA3Q99504 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
EYA3Q99504 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EYA3Q99504 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EYA3Q99504 MST1L-201ENST00000442552 2185 ntBASIC18.35■□□□□ 0.53
EYA3Q99504 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EYA3Q99504 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
EYA3Q99504 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.35■□□□□ 0.53
EYA3Q99504 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EYA3Q99504 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
EYA3Q99504 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC18.35■□□□□ 0.53
EYA3Q99504 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
EYA3Q99504 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EYA3Q99504 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EYA3Q99504 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.35■□□□□ 0.53
EYA3Q99504 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.35■□□□□ 0.53
EYA3Q99504 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
EYA3Q99504 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EYA3Q99504 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
EYA3Q99504 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC18.34■□□□□ 0.53
EYA3Q99504 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
EYA3Q99504 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
EYA3Q99504 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EYA3Q99504 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
EYA3Q99504 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
EYA3Q99504 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.34■□□□□ 0.53
EYA3Q99504 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EYA3Q99504 E2F3P2-201ENST00000447755 1422 ntBASIC18.34■□□□□ 0.53
EYA3Q99504 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EYA3Q99504 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
EYA3Q99504 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EYA3Q99504 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EYA3Q99504 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
EYA3Q99504 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
EYA3Q99504 RN7SKP214-201ENST00000364208 315 ntBASIC18.34■□□□□ 0.53
EYA3Q99504 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EYA3Q99504 RBM38-204ENST00000371219 760 ntTSL 2 BASIC18.34■□□□□ 0.53
EYA3Q99504 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.34■□□□□ 0.53
EYA3Q99504 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
EYA3Q99504 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
EYA3Q99504 CMC1-204ENST00000423894 549 ntTSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms