Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.3■□□□□ 0.2
YME1L1Q96TA2 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
YME1L1Q96TA2 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
YME1L1Q96TA2 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.3■□□□□ 0.2
YME1L1Q96TA2 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.29■□□□□ 0.2
YME1L1Q96TA2 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
YME1L1Q96TA2 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
YME1L1Q96TA2 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
YME1L1Q96TA2 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
YME1L1Q96TA2 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
YME1L1Q96TA2 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
YME1L1Q96TA2 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
YME1L1Q96TA2 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
YME1L1Q96TA2 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
YME1L1Q96TA2 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
YME1L1Q96TA2 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.29■□□□□ 0.2
YME1L1Q96TA2 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
YME1L1Q96TA2 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
YME1L1Q96TA2 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
YME1L1Q96TA2 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
YME1L1Q96TA2 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
YME1L1Q96TA2 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
YME1L1Q96TA2 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.29■□□□□ 0.2
YME1L1Q96TA2 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
YME1L1Q96TA2 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
YME1L1Q96TA2 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
YME1L1Q96TA2 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
YME1L1Q96TA2 MARK2P5-201ENST00000507649 634 ntBASIC16.29■□□□□ 0.2
YME1L1Q96TA2 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.29■□□□□ 0.2
YME1L1Q96TA2 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.29■□□□□ 0.2
YME1L1Q96TA2 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.29■□□□□ 0.2
YME1L1Q96TA2 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
YME1L1Q96TA2 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.29■□□□□ 0.2
YME1L1Q96TA2 AL162426.1-201ENST00000624141 743 ntBASIC16.29■□□□□ 0.2
YME1L1Q96TA2 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.29■□□□□ 0.2
YME1L1Q96TA2 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
YME1L1Q96TA2 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
YME1L1Q96TA2 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.29■□□□□ 0.2
YME1L1Q96TA2 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.29■□□□□ 0.2
YME1L1Q96TA2 REXO1L5P-201ENST00000622260 2098 ntBASIC16.29■□□□□ 0.2
YME1L1Q96TA2 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
YME1L1Q96TA2 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
YME1L1Q96TA2 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
YME1L1Q96TA2 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
YME1L1Q96TA2 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
YME1L1Q96TA2 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
YME1L1Q96TA2 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
YME1L1Q96TA2 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
YME1L1Q96TA2 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 AC092978.1-202ENST00000637590 1327 ntBASIC16.28■□□□□ 0.2
YME1L1Q96TA2 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 RPL17P11-201ENST00000417593 544 ntBASIC16.28■□□□□ 0.2
YME1L1Q96TA2 CMC1-204ENST00000423894 549 ntTSL 2 BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 AC090164.2-201ENST00000611487 516 ntBASIC16.28■□□□□ 0.2
YME1L1Q96TA2 AC068587.8-201ENST00000641239 219 ntBASIC16.28■□□□□ 0.2
YME1L1Q96TA2 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 AP000593.2-201ENST00000542775 1433 ntBASIC16.28■□□□□ 0.2
YME1L1Q96TA2 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.28■□□□□ 0.2
YME1L1Q96TA2 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.27■□□□□ 0.2
YME1L1Q96TA2 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
YME1L1Q96TA2 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
YME1L1Q96TA2 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms