Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNX18Q96RF0 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNX18Q96RF0 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNX18Q96RF0 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNX18Q96RF0 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNX18Q96RF0 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.01□□□□□ -0.17
SNX18Q96RF0 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SNX18Q96RF0 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.01□□□□□ -0.17
SNX18Q96RF0 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SNX18Q96RF0 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
SNX18Q96RF0 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.01□□□□□ -0.17
SNX18Q96RF0 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.01□□□□□ -0.17
SNX18Q96RF0 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SNX18Q96RF0 AC067863.1-201ENST00000494933 530 ntBASIC14.01□□□□□ -0.17
SNX18Q96RF0 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.01□□□□□ -0.17
SNX18Q96RF0 SPCS2P1-201ENST00000561636 679 ntBASIC14.01□□□□□ -0.17
SNX18Q96RF0 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.01□□□□□ -0.17
SNX18Q96RF0 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNX18Q96RF0 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.01□□□□□ -0.17
SNX18Q96RF0 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.01□□□□□ -0.17
SNX18Q96RF0 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.01□□□□□ -0.17
SNX18Q96RF0 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNX18Q96RF0 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.01□□□□□ -0.17
SNX18Q96RF0 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNX18Q96RF0 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.01□□□□□ -0.17
SNX18Q96RF0 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNX18Q96RF0 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.01□□□□□ -0.17
SNX18Q96RF0 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SNX18Q96RF0 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.01□□□□□ -0.17
SNX18Q96RF0 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNX18Q96RF0 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNX18Q96RF0 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNX18Q96RF0 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SNX18Q96RF0 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SNX18Q96RF0 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SNX18Q96RF0 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SNX18Q96RF0 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
SNX18Q96RF0 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14□□□□□ -0.17
SNX18Q96RF0 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
SNX18Q96RF0 AGAP7P-201ENST00000582299 2062 ntBASIC14□□□□□ -0.17
SNX18Q96RF0 AGAP14-201ENST00000624701 2060 ntBASIC14□□□□□ -0.17
SNX18Q96RF0 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SNX18Q96RF0 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
SNX18Q96RF0 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SNX18Q96RF0 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SNX18Q96RF0 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
SNX18Q96RF0 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SNX18Q96RF0 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SNX18Q96RF0 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14□□□□□ -0.17
SNX18Q96RF0 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14□□□□□ -0.17
SNX18Q96RF0 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SNX18Q96RF0 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SNX18Q96RF0 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SNX18Q96RF0 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14□□□□□ -0.17
SNX18Q96RF0 RBPMS2P1-201ENST00000437762 623 ntBASIC14□□□□□ -0.17
SNX18Q96RF0 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14□□□□□ -0.17
SNX18Q96RF0 NME4-207ENST00000450036 985 ntTSL 3 BASIC14□□□□□ -0.17
SNX18Q96RF0 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14□□□□□ -0.17
SNX18Q96RF0 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14□□□□□ -0.17
SNX18Q96RF0 AC026150.2-201ENST00000564693 1156 ntBASIC14□□□□□ -0.17
SNX18Q96RF0 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SNX18Q96RF0 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SNX18Q96RF0 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SNX18Q96RF0 AC005498.2-205ENST00000593218 784 ntBASIC14□□□□□ -0.17
SNX18Q96RF0 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14□□□□□ -0.17
SNX18Q96RF0 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14□□□□□ -0.17
SNX18Q96RF0 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SNX18Q96RF0 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14□□□□□ -0.17
SNX18Q96RF0 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14□□□□□ -0.17
SNX18Q96RF0 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
SNX18Q96RF0 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14□□□□□ -0.17
SNX18Q96RF0 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14□□□□□ -0.17
SNX18Q96RF0 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SNX18Q96RF0 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14□□□□□ -0.17
SNX18Q96RF0 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14□□□□□ -0.17
SNX18Q96RF0 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14□□□□□ -0.17
SNX18Q96RF0 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SNX18Q96RF0 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14□□□□□ -0.17
SNX18Q96RF0 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14□□□□□ -0.17
SNX18Q96RF0 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SNX18Q96RF0 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14□□□□□ -0.17
SNX18Q96RF0 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
SNX18Q96RF0 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SNX18Q96RF0 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14□□□□□ -0.17
SNX18Q96RF0 AC126335.2-201ENST00000623362 4637 ntBASIC14□□□□□ -0.17
SNX18Q96RF0 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
SNX18Q96RF0 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SNX18Q96RF0 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SNX18Q96RF0 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SNX18Q96RF0 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SNX18Q96RF0 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SNX18Q96RF0 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
SNX18Q96RF0 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.99□□□□□ -0.17
SNX18Q96RF0 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SNX18Q96RF0 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SNX18Q96RF0 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SNX18Q96RF0 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SNX18Q96RF0 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SNX18Q96RF0 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SNX18Q96RF0 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms