Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.86■□□□□ 0.45
TRIM47Q96LD4 IMP3P2-201ENST00000489760 475 ntBASIC17.86■□□□□ 0.45
TRIM47Q96LD4 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC17.86■□□□□ 0.45
TRIM47Q96LD4 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.86■□□□□ 0.45
TRIM47Q96LD4 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC17.86■□□□□ 0.45
TRIM47Q96LD4 NDUFV2P1-201ENST00000596415 907 ntBASIC17.86■□□□□ 0.45
TRIM47Q96LD4 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.86■□□□□ 0.45
TRIM47Q96LD4 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM47Q96LD4 AC073347.1-201ENST00000421633 2643 ntBASIC17.86■□□□□ 0.45
TRIM47Q96LD4 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM47Q96LD4 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.86■□□□□ 0.45
TRIM47Q96LD4 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM47Q96LD4 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM47Q96LD4 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TRIM47Q96LD4 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM47Q96LD4 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM47Q96LD4 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM47Q96LD4 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM47Q96LD4 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
TRIM47Q96LD4 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM47Q96LD4 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.86■□□□□ 0.45
TRIM47Q96LD4 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM47Q96LD4 AC134407.2-201ENST00000625089 1978 ntBASIC17.86■□□□□ 0.45
TRIM47Q96LD4 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TRIM47Q96LD4 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
TRIM47Q96LD4 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM47Q96LD4 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM47Q96LD4 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM47Q96LD4 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.85■□□□□ 0.45
TRIM47Q96LD4 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM47Q96LD4 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM47Q96LD4 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.85■□□□□ 0.45
TRIM47Q96LD4 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM47Q96LD4 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM47Q96LD4 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM47Q96LD4 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM47Q96LD4 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.85■□□□□ 0.45
TRIM47Q96LD4 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TRIM47Q96LD4 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TRIM47Q96LD4 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM47Q96LD4 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TRIM47Q96LD4 KRTAP19-9P-201ENST00000421795 191 ntBASIC17.85■□□□□ 0.45
TRIM47Q96LD4 AC253536.4-201ENST00000440539 267 ntBASIC17.85■□□□□ 0.45
TRIM47Q96LD4 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.85■□□□□ 0.45
TRIM47Q96LD4 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.85■□□□□ 0.45
TRIM47Q96LD4 RPS2P36-201ENST00000456516 831 ntBASIC17.85■□□□□ 0.45
TRIM47Q96LD4 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC17.85■□□□□ 0.45
TRIM47Q96LD4 KRT8P35-201ENST00000483942 1338 ntBASIC17.85■□□□□ 0.45
TRIM47Q96LD4 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM47Q96LD4 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TRIM47Q96LD4 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
TRIM47Q96LD4 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.85■□□□□ 0.45
TRIM47Q96LD4 AC126177.1-201ENST00000547829 2218 ntBASIC17.85■□□□□ 0.45
TRIM47Q96LD4 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.85■□□□□ 0.45
TRIM47Q96LD4 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.85■□□□□ 0.45
TRIM47Q96LD4 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC17.85■□□□□ 0.45
TRIM47Q96LD4 SPCS2P2-201ENST00000603270 608 ntBASIC17.85■□□□□ 0.45
TRIM47Q96LD4 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC17.85■□□□□ 0.45
TRIM47Q96LD4 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.85■□□□□ 0.45
TRIM47Q96LD4 AC128714.1-201ENST00000637035 887 ntBASIC17.85■□□□□ 0.45
TRIM47Q96LD4 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM47Q96LD4 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM47Q96LD4 AC144831.1-201ENST00000573312 2656 ntBASIC17.85■□□□□ 0.45
TRIM47Q96LD4 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM47Q96LD4 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM47Q96LD4 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM47Q96LD4 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM47Q96LD4 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM47Q96LD4 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM47Q96LD4 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM47Q96LD4 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM47Q96LD4 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.84■□□□□ 0.45
TRIM47Q96LD4 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM47Q96LD4 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM47Q96LD4 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM47Q96LD4 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM47Q96LD4 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM47Q96LD4 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM47Q96LD4 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM47Q96LD4 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM47Q96LD4 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM47Q96LD4 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM47Q96LD4 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM47Q96LD4 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
TRIM47Q96LD4 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
TRIM47Q96LD4 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
TRIM47Q96LD4 CD8B2-202ENST00000417670 633 ntBASIC17.84■□□□□ 0.45
TRIM47Q96LD4 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.84■□□□□ 0.45
TRIM47Q96LD4 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.84■□□□□ 0.45
TRIM47Q96LD4 MIR5572-201ENST00000583188 137 ntBASIC17.84■□□□□ 0.45
TRIM47Q96LD4 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.84■□□□□ 0.45
TRIM47Q96LD4 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC17.84■□□□□ 0.45
TRIM47Q96LD4 AC097724.1-201ENST00000609581 426 ntBASIC17.84■□□□□ 0.45
TRIM47Q96LD4 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.84■□□□□ 0.45
TRIM47Q96LD4 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.84■□□□□ 0.45
TRIM47Q96LD4 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TRIM47Q96LD4 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM47Q96LD4 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM47Q96LD4 DBET-201ENST00000630918 3363 ntBASIC17.84■□□□□ 0.45
TRIM47Q96LD4 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms