Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.75□□□□□ -0.05
VPS33AQ96AX1 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 ELL2P1-201ENST00000413990 1906 ntBASIC14.74□□□□□ -0.05
VPS33AQ96AX1 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 AC093520.2-201ENST00000561830 333 ntBASIC14.74□□□□□ -0.05
VPS33AQ96AX1 AC015910.1-201ENST00000579400 975 ntBASIC14.74□□□□□ -0.05
VPS33AQ96AX1 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 AC113367.3-201ENST00000508316 1912 ntBASIC14.74□□□□□ -0.05
VPS33AQ96AX1 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
VPS33AQ96AX1 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 SLED1-202ENST00000512051 380 ntBASIC14.73□□□□□ -0.05
VPS33AQ96AX1 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 KRT18P58-201ENST00000527480 1120 ntBASIC14.73□□□□□ -0.05
VPS33AQ96AX1 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 MTDHP5-201ENST00000598980 586 ntBASIC14.73□□□□□ -0.05
VPS33AQ96AX1 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms