Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC20.29■□□□□ 0.84
LTBP4Q8N2S1 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LTBP4Q8N2S1 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
LTBP4Q8N2S1 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LTBP4Q8N2S1 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC20.29■□□□□ 0.84
LTBP4Q8N2S1 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LTBP4Q8N2S1 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LTBP4Q8N2S1 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LTBP4Q8N2S1 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
LTBP4Q8N2S1 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC20.29■□□□□ 0.84
LTBP4Q8N2S1 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.29■□□□□ 0.84
LTBP4Q8N2S1 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LTBP4Q8N2S1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LTBP4Q8N2S1 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LTBP4Q8N2S1 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
LTBP4Q8N2S1 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LTBP4Q8N2S1 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
LTBP4Q8N2S1 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC20.28■□□□□ 0.84
LTBP4Q8N2S1 KRT8P28-201ENST00000433288 1390 ntBASIC20.28■□□□□ 0.84
LTBP4Q8N2S1 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC20.28■□□□□ 0.84
LTBP4Q8N2S1 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
LTBP4Q8N2S1 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
LTBP4Q8N2S1 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
LTBP4Q8N2S1 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC20.28■□□□□ 0.84
LTBP4Q8N2S1 ZNF877P-201ENST00000437614 612 ntBASIC20.28■□□□□ 0.84
LTBP4Q8N2S1 AC025186.1-201ENST00000478174 870 ntBASIC20.28■□□□□ 0.84
LTBP4Q8N2S1 RN7SL524P-201ENST00000581152 300 ntBASIC20.28■□□□□ 0.84
LTBP4Q8N2S1 AL136982.5-201ENST00000605222 294 ntBASIC20.28■□□□□ 0.84
LTBP4Q8N2S1 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC20.28■□□□□ 0.84
LTBP4Q8N2S1 ESR1-214ENST00000638569 132 ntTSL 5 BASIC20.28■□□□□ 0.84
LTBP4Q8N2S1 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
LTBP4Q8N2S1 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LTBP4Q8N2S1 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC20.28■□□□□ 0.84
LTBP4Q8N2S1 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.28■□□□□ 0.84
LTBP4Q8N2S1 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LTBP4Q8N2S1 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LTBP4Q8N2S1 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC20.28■□□□□ 0.84
LTBP4Q8N2S1 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC20.28■□□□□ 0.84
LTBP4Q8N2S1 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
LTBP4Q8N2S1 LINC00682-202ENST00000499082 1384 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LTBP4Q8N2S1 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
LTBP4Q8N2S1 BRD7P5-201ENST00000299197 1822 ntBASIC20.28■□□□□ 0.84
LTBP4Q8N2S1 AL365181.1-201ENST00000564032 1828 ntBASIC20.28■□□□□ 0.84
LTBP4Q8N2S1 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LTBP4Q8N2S1 SAT1-201ENST00000379251 801 ntTSL 2 BASIC20.27■□□□□ 0.84
LTBP4Q8N2S1 SAT1-202ENST00000379253 909 ntTSL 2 BASIC20.27■□□□□ 0.84
LTBP4Q8N2S1 SAT1-203ENST00000379254 868 ntTSL 3 BASIC20.27■□□□□ 0.84
LTBP4Q8N2S1 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LTBP4Q8N2S1 RPL18AP15-201ENST00000430258 517 ntBASIC20.27■□□□□ 0.84
LTBP4Q8N2S1 AL954722.1-201ENST00000431238 259 ntBASIC20.27■□□□□ 0.84
LTBP4Q8N2S1 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LTBP4Q8N2S1 RNASEH2CP1-201ENST00000454281 502 ntBASIC20.27■□□□□ 0.84
LTBP4Q8N2S1 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC20.27■□□□□ 0.84
LTBP4Q8N2S1 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LTBP4Q8N2S1 GAS7-216ENST00000583882 553 ntTSL 5 BASIC20.27■□□□□ 0.84
LTBP4Q8N2S1 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC20.27■□□□□ 0.84
LTBP4Q8N2S1 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
LTBP4Q8N2S1 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
LTBP4Q8N2S1 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC20.27■□□□□ 0.84
LTBP4Q8N2S1 AGGF1P1-201ENST00000509500 2073 ntBASIC20.27■□□□□ 0.84
LTBP4Q8N2S1 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC20.27■□□□□ 0.84
LTBP4Q8N2S1 FAM226B-201ENST00000602508 1490 ntBASIC20.27■□□□□ 0.84
LTBP4Q8N2S1 RPL4P6-201ENST00000438116 1304 ntBASIC20.27■□□□□ 0.84
LTBP4Q8N2S1 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LTBP4Q8N2S1 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC20.27■□□□□ 0.84
LTBP4Q8N2S1 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC20.27■□□□□ 0.84
LTBP4Q8N2S1 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC20.27■□□□□ 0.84
LTBP4Q8N2S1 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LTBP4Q8N2S1 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LTBP4Q8N2S1 AC019109.1-201ENST00000401725 1874 ntBASIC20.27■□□□□ 0.84
LTBP4Q8N2S1 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LTBP4Q8N2S1 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LTBP4Q8N2S1 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC20.27■□□□□ 0.83
LTBP4Q8N2S1 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
LTBP4Q8N2S1 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC20.27■□□□□ 0.83
LTBP4Q8N2S1 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC20.27■□□□□ 0.83
LTBP4Q8N2S1 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC20.27■□□□□ 0.83
LTBP4Q8N2S1 CES1P2-201ENST00000566467 1242 ntBASIC20.27■□□□□ 0.83
LTBP4Q8N2S1 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
LTBP4Q8N2S1 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC20.27■□□□□ 0.83
LTBP4Q8N2S1 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
LTBP4Q8N2S1 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LTBP4Q8N2S1 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
LTBP4Q8N2S1 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LTBP4Q8N2S1 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC20.26■□□□□ 0.83
LTBP4Q8N2S1 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LTBP4Q8N2S1 AL591122.2-201ENST00000624125 1853 ntBASIC20.26■□□□□ 0.83
LTBP4Q8N2S1 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LTBP4Q8N2S1 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LTBP4Q8N2S1 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LTBP4Q8N2S1 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LTBP4Q8N2S1 AL513523.2-202ENST00000427283 2040 ntBASIC20.26■□□□□ 0.83
LTBP4Q8N2S1 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC20.26■□□□□ 0.83
LTBP4Q8N2S1 PLA2G2A-201ENST00000375111 970 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LTBP4Q8N2S1 U73169.1-201ENST00000395152 367 ntBASIC20.26■□□□□ 0.83
LTBP4Q8N2S1 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC20.26■□□□□ 0.83
LTBP4Q8N2S1 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC20.26■□□□□ 0.83
LTBP4Q8N2S1 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC20.26■□□□□ 0.83
LTBP4Q8N2S1 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC20.26■□□□□ 0.83
LTBP4Q8N2S1 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms