Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.34□□□□□ -0.11
DEPDC4Q8N2C3 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DEPDC4Q8N2C3 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
DEPDC4Q8N2C3 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
DEPDC4Q8N2C3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DEPDC4Q8N2C3 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.34□□□□□ -0.11
DEPDC4Q8N2C3 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.34□□□□□ -0.11
DEPDC4Q8N2C3 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.34□□□□□ -0.11
DEPDC4Q8N2C3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DEPDC4Q8N2C3 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DEPDC4Q8N2C3 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.34□□□□□ -0.11
DEPDC4Q8N2C3 AL357833.2-202ENST00000413757 372 ntTSL 3 BASIC14.34□□□□□ -0.11
DEPDC4Q8N2C3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.34□□□□□ -0.11
DEPDC4Q8N2C3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.34□□□□□ -0.11
DEPDC4Q8N2C3 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.34□□□□□ -0.11
DEPDC4Q8N2C3 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.34□□□□□ -0.11
DEPDC4Q8N2C3 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DEPDC4Q8N2C3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DEPDC4Q8N2C3 AC011467.4-201ENST00000594891 528 ntBASIC14.34□□□□□ -0.11
DEPDC4Q8N2C3 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
DEPDC4Q8N2C3 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DEPDC4Q8N2C3 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
DEPDC4Q8N2C3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DEPDC4Q8N2C3 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.34□□□□□ -0.11
DEPDC4Q8N2C3 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DEPDC4Q8N2C3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.34□□□□□ -0.11
DEPDC4Q8N2C3 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DEPDC4Q8N2C3 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DEPDC4Q8N2C3 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DEPDC4Q8N2C3 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
DEPDC4Q8N2C3 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
DEPDC4Q8N2C3 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
DEPDC4Q8N2C3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DEPDC4Q8N2C3 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DEPDC4Q8N2C3 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
DEPDC4Q8N2C3 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.33□□□□□ -0.11
DEPDC4Q8N2C3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
DEPDC4Q8N2C3 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
DEPDC4Q8N2C3 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
DEPDC4Q8N2C3 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC14.33□□□□□ -0.11
DEPDC4Q8N2C3 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
DEPDC4Q8N2C3 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
DEPDC4Q8N2C3 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.33□□□□□ -0.11
DEPDC4Q8N2C3 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.33□□□□□ -0.11
DEPDC4Q8N2C3 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.33□□□□□ -0.11
DEPDC4Q8N2C3 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 AL139400.1-201ENST00000366220 510 ntBASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 AC105233.2-201ENST00000523697 349 ntBASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 AF228730.5-201ENST00000530288 346 ntBASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 AP001059.3-201ENST00000619053 235 ntBASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.33□□□□□ -0.12
DEPDC4Q8N2C3 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DEPDC4Q8N2C3 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.32□□□□□ -0.12
DEPDC4Q8N2C3 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.32□□□□□ -0.12
DEPDC4Q8N2C3 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DEPDC4Q8N2C3 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DEPDC4Q8N2C3 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.32□□□□□ -0.12
DEPDC4Q8N2C3 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
DEPDC4Q8N2C3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
DEPDC4Q8N2C3 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
DEPDC4Q8N2C3 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DEPDC4Q8N2C3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms