Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 BOLA2P3-201ENST00000404566 256 ntBASIC15.06■□□□□ 0
TRIM48Q8IWZ4 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 USP32P1-208ENST00000506594 1164 ntBASIC15.06■□□□□ 0
TRIM48Q8IWZ4 KRT18P25-201ENST00000508931 1278 ntBASIC15.06■□□□□ 0
TRIM48Q8IWZ4 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 MIR6805-201ENST00000615055 62 ntBASIC15.06■□□□□ 0
TRIM48Q8IWZ4 BX539320.1-201ENST00000623759 877 ntBASIC15.06■□□□□ 0
TRIM48Q8IWZ4 AC005252.2-201ENST00000624630 1141 ntBASIC15.06■□□□□ 0
TRIM48Q8IWZ4 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.06■□□□□ 0
TRIM48Q8IWZ4 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRIM48Q8IWZ4 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.05■□□□□ 0
TRIM48Q8IWZ4 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
TRIM48Q8IWZ4 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.05■□□□□ 0
TRIM48Q8IWZ4 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.05■□□□□ 0
TRIM48Q8IWZ4 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRIM48Q8IWZ4 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
TRIM48Q8IWZ4 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.05■□□□□ 0
TRIM48Q8IWZ4 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
TRIM48Q8IWZ4 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
TRIM48Q8IWZ4 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRIM48Q8IWZ4 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM48Q8IWZ4 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM48Q8IWZ4 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.05■□□□□ -0
TRIM48Q8IWZ4 BAATP1-201ENST00000412284 1225 ntBASIC15.05■□□□□ -0
TRIM48Q8IWZ4 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.05■□□□□ -0
TRIM48Q8IWZ4 BCRP2-202ENST00000447763 634 ntBASIC15.05■□□□□ -0
TRIM48Q8IWZ4 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.05■□□□□ -0
TRIM48Q8IWZ4 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.05■□□□□ -0
TRIM48Q8IWZ4 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TRIM48Q8IWZ4 BCRP6-201ENST00000510112 632 ntBASIC15.05■□□□□ -0
TRIM48Q8IWZ4 BCRP7-201ENST00000511549 544 ntBASIC15.05■□□□□ -0
TRIM48Q8IWZ4 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.05■□□□□ -0
TRIM48Q8IWZ4 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.05■□□□□ -0
TRIM48Q8IWZ4 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRIM48Q8IWZ4 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.05■□□□□ -0
TRIM48Q8IWZ4 CLUHP6-201ENST00000580789 941 ntBASIC15.05■□□□□ -0
TRIM48Q8IWZ4 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.05■□□□□ -0
TRIM48Q8IWZ4 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.05■□□□□ -0
TRIM48Q8IWZ4 AC134312.5-201ENST00000568031 1313 ntBASIC15.05■□□□□ -0
TRIM48Q8IWZ4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TRIM48Q8IWZ4 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
TRIM48Q8IWZ4 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.05■□□□□ -0
TRIM48Q8IWZ4 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM48Q8IWZ4 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
TRIM48Q8IWZ4 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRIM48Q8IWZ4 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.05■□□□□ -0
TRIM48Q8IWZ4 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRIM48Q8IWZ4 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM48Q8IWZ4 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ -0
TRIM48Q8IWZ4 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM48Q8IWZ4 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM48Q8IWZ4 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM48Q8IWZ4 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM48Q8IWZ4 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM48Q8IWZ4 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRIM48Q8IWZ4 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.05■□□□□ -0
TRIM48Q8IWZ4 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
TRIM48Q8IWZ4 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.05■□□□□ -0
TRIM48Q8IWZ4 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM48Q8IWZ4 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
TRIM48Q8IWZ4 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.04■□□□□ -0
TRIM48Q8IWZ4 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms